| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3019 |
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| Symbol | |
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| ID | 8133974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3404543 |
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| End bp | 3406123 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866302 |
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| Product | PTS system, glucose-like IIB subunint |
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| Protein accession | YP_003018578 |
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| Protein GI | 253689388 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG CGGTCAATGC ATTGCAAAAT TTCGGCAAGT CCCTGTATGG GCCGGTGCTG
ATACTCCCGA TTGTCGGGCT ATTCATCGCA TTTGGGAACG TGTTTGGTAA CGGCAATTTA
GCGGGCTATG TCCCTTTGCT TAATCACCCT TTGATTCAGG ATTTTGGTCA ACTGGTGTCC
AAATCTGCCG TGGCGATTCT GGCTAATTTG GCGCTGGTGT TCGCCGTTGG GATCCCGATC
GGACTGGCGA AACGCGATAA GGGCTACGCC GCGCTGATCG GGCTGGTGAT GTTCATCATC
TTCATTAACG CCATGAATAT CACGCTGCAA TTACAGGGCA AGCTCGTGCC AGCCGCAGAG
ATGCGCGCCG CCGGACAAGG TATGGTGCTG GGCGTTCAGG TGCTGGAAAT GGGCGTTTTC
GCCGGCATTC TGATCGGCGG ATTAGCAGGC TACCTGTATA ACCGCTATTC CAGTAAACAG
TTTAACGGCG TCATGGCGAT CTATTCCGGC CACTGCTTCG TCGCCATCCT GGTTATTCCG
CTGGCGATTG CGCTGGGCTT TGCGATGAGC GCGCTGTGGC CGTTTGCTCA GCACGGCATT
ACCTGGCTGG CCTTCGCGAT TAAAGGGGCA GGCCCTGTTG GCATCGCCAT TTATGGCTTT
CTGGAACGCG TGCTGATCCC CACCGGGCTG CATCATCTGG TCTATACCCC GTTCCTATAC
ACCGAACTGG GCGGAACCGA AGAGGTATGC GGCAAGCTGT ACCAAGGCGC ACGCAACATC
TATTTTGCTG AAATGGCCTG TCAGGACGTC AAGCAGTTGA GTTCAACCGT GGTCTGGGAT
GCGCGCGGTA TCAGTAAAAT GTTTGGTCTG ACTGCCGCGG CGCTGGCGAT GTATGTCACG
GCTAAGCCAG AGAAACGTCT GGCCGCCAAA GCCATCCTGA TTCCGGCCGC TTTTACCTCT
TTCTTACTGG GCGTCACCGA GCCGCTAGAG TTCTCCTTCC TGTTCGTCGC GCCCATGCTG
TTTGCCGTCC ACGCCGTACT GACCGGCATA GGCATGATGC TGTTCTCCAT CATGGGCGTG
CATGCGATTG GTGCCAACGG CGTCATCGAC TTCCTGCTTT ATAACCTTCC GCTGGGCATT
GAAAAATCCA ACTGGCCAAT GTACATCGCG GTCGGACTGA CGATGTCGGT GATTTACTTC
TTCGTCTTCC GCTTCCTGAT TCTGTATTTC GACATGCCAA CACCGGGGCG TGAAACCGAC
GAAGAAGAAA CACGGCTTTA TTCTAAAACC GAATATCAGG CCAAAACCGA AGGTCAGGTA
AAAACACCGG ACGCGGTGAA AGGTGATGCT CCACCTGTCG GCGCCACCAT CATCGCCGGG
CTGGGCGGTA AACCGAATAT CGAGGTGGTG GATAACTGCT ACACCCGCCT GCGGGTCACG
CTGATCGACC CGAATCTGGT AGATGAACAA CAGCTTAAGA GCACCGGTGC GAAAGCCGTT
ATCCGGCAGG GTAACAACGT ACAGGTGGTT TACGGACTTC ACGTCAAAAC GATACGCGAA
GCAGTTGAAA ACGCGCTTTA A
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| Protein sequence | MKRAVNALQN FGKSLYGPVL ILPIVGLFIA FGNVFGNGNL AGYVPLLNHP LIQDFGQLVS
KSAVAILANL ALVFAVGIPI GLAKRDKGYA ALIGLVMFII FINAMNITLQ LQGKLVPAAE
MRAAGQGMVL GVQVLEMGVF AGILIGGLAG YLYNRYSSKQ FNGVMAIYSG HCFVAILVIP
LAIALGFAMS ALWPFAQHGI TWLAFAIKGA GPVGIAIYGF LERVLIPTGL HHLVYTPFLY
TELGGTEEVC GKLYQGARNI YFAEMACQDV KQLSSTVVWD ARGISKMFGL TAAALAMYVT
AKPEKRLAAK AILIPAAFTS FLLGVTEPLE FSFLFVAPML FAVHAVLTGI GMMLFSIMGV
HAIGANGVID FLLYNLPLGI EKSNWPMYIA VGLTMSVIYF FVFRFLILYF DMPTPGRETD
EEETRLYSKT EYQAKTEGQV KTPDAVKGDA PPVGATIIAG LGGKPNIEVV DNCYTRLRVT
LIDPNLVDEQ QLKSTGAKAV IRQGNNVQVV YGLHVKTIRE AVENAL
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