Gene PC1_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3018 
Symbolndk 
ID8133973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3403755 
End bp3404183 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content51% 
IMG OID644866301 
Productnucleoside diphosphate kinase 
Protein accessionYP_003018577 
Protein GI253689387 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATAG AACGTACCTT CTCCATCGTA AAACCTAATG CGGTTGCCAA GAATGCGATT 
GGTTCAATTT ACGCACGCTT TGAAAGCGCG GGTTTTACCC TTGTTGCGGC TAAAATGCTG
CGTCTGAGCC GTGAGCAGGC GGAAGGTTTC TACGCTGAAC ATAAAGGCAA GCCATTCTTT
GATGGCCTGG TCGAATTCAT GATGTCTGGC CCAATCATGG TGCAGGTGCT GGAAGGTGAA
AACGCGGTTC AACGTAACCG TGACATTATG GGTGCCACAA ACCCGGCAAA TGCACTGGCG
GGAACGCTGC GTGCTGATTA CGCGGATAGC TTCACAGCGA ACGCGGTACA CGGTTCTGAT
TCCATTGAAT CCGCTCAGCG TGAAATTGCT TATTTCTTCA GCGACGACGA AATCTGCCCA
CGCGCCTAA
 
Protein sequence
MTIERTFSIV KPNAVAKNAI GSIYARFESA GFTLVAAKML RLSREQAEGF YAEHKGKPFF 
DGLVEFMMSG PIMVQVLEGE NAVQRNRDIM GATNPANALA GTLRADYADS FTANAVHGSD
SIESAQREIA YFFSDDEICP RA