Gene PC1_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3017 
Symbol 
ID8133972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3402220 
End bp3403479 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content52% 
IMG OID644866300 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_003018576 
Protein GI253689386 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAGC AAATCGTGTC TGAAATCATC GTGCCTGAAA CAGCCGCATC TACAACTATC 
GCGTCTACAA CTACTACCGT ATCCGAGCAA ACCGTGTCCG AATTCTCTCC GGCGTCCGCT
GATGCCTCCC AATCCGTTAA AACCAGTGCG GAAAAAATTA ATCTGCTGGA TCTTAACCGT
CAGCAAATGC GTGACCTCTT CATATCGATG GGAGAGAAAC CGTTCCGCGC CGATCAGGTC
ATGAAGTGGA TTTATCACTA CTGCTGTGAT GACTTCAATC AGATGACGGA TATCAACAAA
GTCTTCCGTT CCAAATTGCA GGAAATCGCT GAAATTCGCG CCCCCGAAGT GGTGGATGAA
CAGCGTTCTT CCGACGGCAC GATTAAGTGG GCGATTCTGG TGGGCGGCCA GCGGGTCGAA
ACCGTTTATA TTCCAGAAGA AGATCGCGCC ACGCTGTGCG TATCGTCTCA GGTAGGTTGT
GCGCTGGAGT GCAAATTCTG TTCAACGGCG CAGCAGGGCT TTAACCGTAA CCTGCGCGTA
TCGGAAATTA TCGGCCAGGT GTGGCGTGCG GCGAAAATCA TCGGCGCTTT TAAAGTCACC
GGTCAGCGTC CCATCACTAA CGTGGTGATG ATGGGTATGG GCGAACCGCT GCTGAACCTG
ACTAACGTGG TGCCAGCGAT GGAAATCATG CTGGATGATT TCGGTTTCGG TCTGTCCAAA
CGTCGTGTGA CGCTGTCCAC GTCTGGCGTC GTGCCTGCGT TGGATAAACT GGGCGATATG
ATTGATGTCG CGCTGGCAAT TTCCCTGCAT GCGCCGACCG ACGACATCCG CAATGAAATC
ATGCCGATCA ACAAAAAGTA CAATATCGAG ATGTTCCTGA GTGCAGTACG TCGCTATCTG
GAAAAATCCA ATGCGAATCA GGGACGTGTT ACCGTTGAGT ATGTGATGTT GGATCATATC
AATGATGGTA CTGAGCATGC GCATCAACTG GCTGAATGCC TGAAAGATAC GCCGTGCAAG
ATTAACCTGA TTCCATGGAA CCCGTTCCCA GGCGCGCCGT ATGGCCGTAG CTCAAACAGC
CGCGTTGACC GTTTCTCCAA GGTACTGATG GAGTATGGCT TTACGACGAT CGTACGTAAA
ACCCGTGGGG ATGACATTGA TGCTGCCTGC GGCCAGCTGG CTGGTGAAGT CGTGGACAGA
ACCAAACGCA CGCTGAAGAA GAAAATGGCG GGTGAACCTA TCGCGGTGAA AGCGGTCTAA
 
Protein sequence
MSKQIVSEII VPETAASTTI ASTTTTVSEQ TVSEFSPASA DASQSVKTSA EKINLLDLNR 
QQMRDLFISM GEKPFRADQV MKWIYHYCCD DFNQMTDINK VFRSKLQEIA EIRAPEVVDE
QRSSDGTIKW AILVGGQRVE TVYIPEEDRA TLCVSSQVGC ALECKFCSTA QQGFNRNLRV
SEIIGQVWRA AKIIGAFKVT GQRPITNVVM MGMGEPLLNL TNVVPAMEIM LDDFGFGLSK
RRVTLSTSGV VPALDKLGDM IDVALAISLH APTDDIRNEI MPINKKYNIE MFLSAVRRYL
EKSNANQGRV TVEYVMLDHI NDGTEHAHQL AECLKDTPCK INLIPWNPFP GAPYGRSSNS
RVDRFSKVLM EYGFTTIVRK TRGDDIDAAC GQLAGEVVDR TKRTLKKKMA GEPIAVKAV