Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3017 |
Symbol | |
ID | 8133972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3402220 |
End bp | 3403479 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866300 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_003018576 |
Protein GI | 253689386 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAGC AAATCGTGTC TGAAATCATC GTGCCTGAAA CAGCCGCATC TACAACTATC GCGTCTACAA CTACTACCGT ATCCGAGCAA ACCGTGTCCG AATTCTCTCC GGCGTCCGCT GATGCCTCCC AATCCGTTAA AACCAGTGCG GAAAAAATTA ATCTGCTGGA TCTTAACCGT CAGCAAATGC GTGACCTCTT CATATCGATG GGAGAGAAAC CGTTCCGCGC CGATCAGGTC ATGAAGTGGA TTTATCACTA CTGCTGTGAT GACTTCAATC AGATGACGGA TATCAACAAA GTCTTCCGTT CCAAATTGCA GGAAATCGCT GAAATTCGCG CCCCCGAAGT GGTGGATGAA CAGCGTTCTT CCGACGGCAC GATTAAGTGG GCGATTCTGG TGGGCGGCCA GCGGGTCGAA ACCGTTTATA TTCCAGAAGA AGATCGCGCC ACGCTGTGCG TATCGTCTCA GGTAGGTTGT GCGCTGGAGT GCAAATTCTG TTCAACGGCG CAGCAGGGCT TTAACCGTAA CCTGCGCGTA TCGGAAATTA TCGGCCAGGT GTGGCGTGCG GCGAAAATCA TCGGCGCTTT TAAAGTCACC GGTCAGCGTC CCATCACTAA CGTGGTGATG ATGGGTATGG GCGAACCGCT GCTGAACCTG ACTAACGTGG TGCCAGCGAT GGAAATCATG CTGGATGATT TCGGTTTCGG TCTGTCCAAA CGTCGTGTGA CGCTGTCCAC GTCTGGCGTC GTGCCTGCGT TGGATAAACT GGGCGATATG ATTGATGTCG CGCTGGCAAT TTCCCTGCAT GCGCCGACCG ACGACATCCG CAATGAAATC ATGCCGATCA ACAAAAAGTA CAATATCGAG ATGTTCCTGA GTGCAGTACG TCGCTATCTG GAAAAATCCA ATGCGAATCA GGGACGTGTT ACCGTTGAGT ATGTGATGTT GGATCATATC AATGATGGTA CTGAGCATGC GCATCAACTG GCTGAATGCC TGAAAGATAC GCCGTGCAAG ATTAACCTGA TTCCATGGAA CCCGTTCCCA GGCGCGCCGT ATGGCCGTAG CTCAAACAGC CGCGTTGACC GTTTCTCCAA GGTACTGATG GAGTATGGCT TTACGACGAT CGTACGTAAA ACCCGTGGGG ATGACATTGA TGCTGCCTGC GGCCAGCTGG CTGGTGAAGT CGTGGACAGA ACCAAACGCA CGCTGAAGAA GAAAATGGCG GGTGAACCTA TCGCGGTGAA AGCGGTCTAA
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Protein sequence | MSKQIVSEII VPETAASTTI ASTTTTVSEQ TVSEFSPASA DASQSVKTSA EKINLLDLNR QQMRDLFISM GEKPFRADQV MKWIYHYCCD DFNQMTDINK VFRSKLQEIA EIRAPEVVDE QRSSDGTIKW AILVGGQRVE TVYIPEEDRA TLCVSSQVGC ALECKFCSTA QQGFNRNLRV SEIIGQVWRA AKIIGAFKVT GQRPITNVVM MGMGEPLLNL TNVVPAMEIM LDDFGFGLSK RRVTLSTSGV VPALDKLGDM IDVALAISLH APTDDIRNEI MPINKKYNIE MFLSAVRRYL EKSNANQGRV TVEYVMLDHI NDGTEHAHQL AECLKDTPCK INLIPWNPFP GAPYGRSSNS RVDRFSKVLM EYGFTTIVRK TRGDDIDAAC GQLAGEVVDR TKRTLKKKMA GEPIAVKAV
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