| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3014 |
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| Symbol | ispG |
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| ID | 8133969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3399104 |
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| End bp | 3400225 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866297 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003018573 |
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| Protein GI | 253689383 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAACG CTGCACCCAT AACCCGTCGA AAATCAAAAC GGATTTACGT CGGCAAGGTG
CCTGTAGGTG ATGGTGCGCC GATTGCGGTG CAATCTATGA CCAACACCCG AACCACCGAC
GTTGAAGCTA CCGTCAATCA AATCAGATCG CTGGAACGTG TTGGCGTCGA TATTGTTCGC
GTCTCCGTGC CAACGATGGA CGCGGCGGAA GCCTTTAAGC TTATCAAACA GCAGGTGAAT
GTCCCGCTCG TCGCCGACAT TCATTTTGAC TACCGCATCG CGCTGAAAGT CGCGGAATAC
GGCGTCGACT GTCTGCGCAT CAACCCCGGT AATATTGGTA ACGAAGAGCG TATTCGCTCG
GTTGTCGATT GTGCGCGTTA CAACAATATT CCGATCCGTA TTGGCGTGAA CGGCGGTTCG
CTGGAAAAAG ATTTGCAGGA AAAATACGGC GAACCAACGC CGGAAGCGCT GTTGGAATCG
GCGATGCGCC ATGTCGATAT CCTCGATCGC CTGAATTTCG ATCAGTTTAA AGTCAGCGTT
AAAGCCTCGG ATGTTTTTCT GGCAGTGCAA TCTTATCGCC TGCTGGCAGC GCGTATCGAT
CAGCCGCTGC ACCTTGGTAT TACCGAAGCC GGTGGCGCAC GTAGCGGCGC GGTGAAATCG
GCTATTGGCC TCGGTCTGCT ACTGTCCGAA GGCATTGGTG ACACGCTGCG TATTTCACTG
GCGGCCGATC CGGTTGAGGA AGTGAAAGTC GGCTTTGATA TCCTGAAGTC ACTGCGCATT
CGTTCACGCG GAATCAACTT TATTGCTTGC CCGACCTGTT CCCGTCAGGA ATTTGACGTG
ATCGGGACGG TGAACGCGCT GGAACAACGG TTGGAAGACA TTATCACGCC GATGGATGTG
TCGATTATCG GCTGCGTGGT GAATGGTCCC GGTGAAGCGC TGGTGTCGAC CATTGGCGTC
ACCGGTGGAC ATAACAAGAG CGGCTTCTAT GAAGACGGCG TGCGGCAGAG AGAGCGCTTC
GATAACGAAC AGATGATCGA TCAGTTAGAA GCCAAGATCC GCGCCAAAGC CTCCATGATG
GACGAAAATC AGCGTATTAC CGTCAATCTG GTGGATAAAT AA
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| Protein sequence | MHNAAPITRR KSKRIYVGKV PVGDGAPIAV QSMTNTRTTD VEATVNQIRS LERVGVDIVR
VSVPTMDAAE AFKLIKQQVN VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRS
VVDCARYNNI PIRIGVNGGS LEKDLQEKYG EPTPEALLES AMRHVDILDR LNFDQFKVSV
KASDVFLAVQ SYRLLAARID QPLHLGITEA GGARSGAVKS AIGLGLLLSE GIGDTLRISL
AADPVEEVKV GFDILKSLRI RSRGINFIAC PTCSRQEFDV IGTVNALEQR LEDIITPMDV
SIIGCVVNGP GEALVSTIGV TGGHNKSGFY EDGVRQRERF DNEQMIDQLE AKIRAKASMM
DENQRITVNL VDK
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