| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3011 |
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| Symbol | |
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| ID | 8133966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3395866 |
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| End bp | 3397047 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866294 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_003018570 |
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| Protein GI | 253689380 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTGC GTAAAACACT GTTGGTAGGA CTGGTTTCTG TTGCCCTGCT GAGCGGATGC
TCGCTGTTTA ACAGCGAAGA AGATGTCGTC ACTATGTCTC CACTGCCGCA GGTGGAAAAC
CAGTTCACGC CAACCAAGGT GTGGAACAGC TCGGTTGGGA GTGGTATTGG CGAGTTTTAC
TCCAATCTTC ATCCCGCATG GCAGGACAAC CGTGTTTTTG CCGCCGATCG TCGTGGCACC
GTGAAAGCGA TGGATCTAAG TGACGGCAAA GAGATTTGGC GCGCCGATCT GTCTGAGAAG
ACCAATTTCT TCTCCCGCAA TAATCCGGTG CTGCTGTCTG GTGGCGTAAC GGTTTCTGGC
AACCACGTCT ATGTTGGTAG TGAAAAGGCG CAGGTCTATG CGCTGAATGC AGAAGATGGT
ACGCCAGTAT GGCAGACGAA AGTGGCAGGC GAAGCGCTGT CTCGCCCTGT CGTCAGCGAC
GGTGTGGTGC TGATTCACAC TGGCAACGGC ATGTTGCAGG CATTGAATGA AGCGGATGGC
GCTATCAAAT GGAGCGTCAA CCTGGATATG CCAACGTTGT CTCTGCGTGG TGAATCTGCC
CCGACAACCG CATTTGGTGC GGCGATTGTG GGTGGTGACA ACGGTCGTGT AAACGCCGTG
ATGATCAATC AGGGTCAGCT TATCTGGCAG CAGCGTATTT CACAGCCGAG TGGCGCGACC
GAAATCGATC GTCTGAACGA TGTCGATACG ACGCCGGTTG TCGCGGGCGA AGTGGTTTAC
GCGTTGGGTT ACAATGGCAA CATGACCGCG CTGGATCTGC GTTCCGGTCA GATTCTGTGG
AAACGTGAAC TGGGCTCAGT GCATGATTTC ATCATCGACG GCGACCGCAT CTACCTGGTC
GATCAGGACG ATCGCGTTGT TGCATTGAAC ACTAACGGTG GCGTGAGTCT GTGGCGTCAA
AGCGATCTGC TGCACCGTAA CTTAACGGCA CCGGCGCTGT ATAACGGCTA TCTGGTAGTG
GGCGATGCCG AAGGTTATCT GCACTGGCTG AATACGGCGG ATGGTCGTTT TGTGGCGCAG
CAAAAAGTGG ATAGCTCTGG CTTCCTCGGC AAGCCTGTGG TTGCCAGCGA CAAGCTGCTG
ATTCAGGCGA AAAACGGTGA TGTCTACGCG TTCACCCGCT AG
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| Protein sequence | MQLRKTLLVG LVSVALLSGC SLFNSEEDVV TMSPLPQVEN QFTPTKVWNS SVGSGIGEFY
SNLHPAWQDN RVFAADRRGT VKAMDLSDGK EIWRADLSEK TNFFSRNNPV LLSGGVTVSG
NHVYVGSEKA QVYALNAEDG TPVWQTKVAG EALSRPVVSD GVVLIHTGNG MLQALNEADG
AIKWSVNLDM PTLSLRGESA PTTAFGAAIV GGDNGRVNAV MINQGQLIWQ QRISQPSGAT
EIDRLNDVDT TPVVAGEVVY ALGYNGNMTA LDLRSGQILW KRELGSVHDF IIDGDRIYLV
DQDDRVVALN TNGGVSLWRQ SDLLHRNLTA PALYNGYLVV GDAEGYLHWL NTADGRFVAQ
QKVDSSGFLG KPVVASDKLL IQAKNGDVYA FTR
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