| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3006 |
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| Symbol | |
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| ID | 8133961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3391501 |
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| End bp | 3392544 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866289 |
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| Product | peptidase M4 thermolysin |
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| Protein accession | YP_003018565 |
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| Protein GI | 253689375 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00558937 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCA GACCGATTTG TAGCGTGATT CCCCCTTATA TTTTGCATCG CATTATTGCA
AACGGCACAG ACGAGCAGCG CCACTGCGCG CAACAGACGC TGATGCACGT TCAGTCATTA
ATGGTCAGCC ACAATCCACG CCCGGAGCCC CATGAGAAAT TACCCGCCGG GCAGGCTAAT
CGCAACATCC ACGATGCCGA ACAGCAGCAA CAGTTGCCCG GCAAGCAGGT GCGTGCGGAA
GGCCAGCCCA GCAACGGTGA CATCGCCGTC GATGAAGCCT ACAACTATCT GGGTGTCACC
TATGATTTCT TCTGGAAGAT TTTCCAACGT AATTCACTGG ACGCCGAGGG ACTGCCGCTG
ACGGGCACCG TGCATTACGG TCAGGATTAC CAGAACGCCT TCTGGAACGG GCAGCAGATG
GTATTCGGAG ATGGCGACGG CAAAATCTTT AATCGCTTCA CGATTGCGCT GGATGTGGTC
GCGCATGAAC TCGCTCACGG CATTACCGAA CACGAAGCAG GACTGATTTA TTTTCGTCAG
TCCGGCGCGC TGAACGAATC ACTTTCCGAC GTCTTTGGTT CTATGGTCAA GCAGTACCAT
TTGGGGCAAA CCGCTGAGCA GGCGGACTGG TTTATCGGTG CTGATCTGCT GGCAGACGGT
ATTCACGGGA TGGGGCTGCG GTCGATGTCT CACCCAGGCA CCGCATATGA TGATGAACTG
CTAGGGATCG ATCCCCAGCC CTCTCATATG AGTGAATATG TGAACACGCG CGAAGACAAC
GGCGGCGTAC ACTTGAATTC CGGCATTCCC AACCGAGCAT TCTACCTGAC AGCCATCGCG
CTGGGCGGGC ATTCCTGGGA AAAAGCTGGC CGCATCTGGT ACGACACGCT GTGCGATAAG
TCACTGCCGC AAAATGCGGA TTTCGAAATT TTCGCGCGCC ATACGATCCA ACATGCCGCT
AAGCGTTTTA ACAACACCGT TGCGGATATC GTCATGCAGT CGTGGGAAAC CGTGGGCGTG
GAGGTTCGTC AGGAGTTCTT ATGA
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| Protein sequence | MKSRPICSVI PPYILHRIIA NGTDEQRHCA QQTLMHVQSL MVSHNPRPEP HEKLPAGQAN
RNIHDAEQQQ QLPGKQVRAE GQPSNGDIAV DEAYNYLGVT YDFFWKIFQR NSLDAEGLPL
TGTVHYGQDY QNAFWNGQQM VFGDGDGKIF NRFTIALDVV AHELAHGITE HEAGLIYFRQ
SGALNESLSD VFGSMVKQYH LGQTAEQADW FIGADLLADG IHGMGLRSMS HPGTAYDDEL
LGIDPQPSHM SEYVNTREDN GGVHLNSGIP NRAFYLTAIA LGGHSWEKAG RIWYDTLCDK
SLPQNADFEI FARHTIQHAA KRFNNTVADI VMQSWETVGV EVRQEFL
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