| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2988 |
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| Symbol | |
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| ID | 8133943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3374913 |
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| End bp | 3375815 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866271 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003018547 |
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| Protein GI | 253689357 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.8288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAATC CTGCGCATTT TGACCTCCAG TCGCTCCGCA TCTTTTTACA GGTTGCCCAG
ACCGGCAGCC TGACCAAAGC CGCAGAAAAA TTCCACATCA CGCTTTCTGC CCTGAGTAAA
CGTATCGCCG AGCTGGAGCG TACCGTGGAC TGTGCGCTGT TCATCCGCAT GCCGCGCGGC
CTGACGTTAA CGCCAGCCGG TAAAGAACTG GTGAATCTCG CAGGCAATGT GTTGAGCAAC
GTGGAGCGCA TGGCGAGCGA AATGAATGAC TATGCCGTTG GCGTGCGCGG CCACGTACAC
ATGTGGGCAA ATACCTCGGC GATTATTCAG TTTCTTCCGC AGGATCTGGC GTCCTTCCTT
CTGGCCCGAC CGCTTATTCG TATTAACCTT GAGGAAAAGC TCAGTAAAAC CGTGGTGACG
GCGCTGGCGA TGGGAGATGC CGATATCGGT ATCTTCGCTG ACAATGTCGG ATCGCAAGGG
GTCGAGAAGA TTCCTTACCG TAAGGACAAG CTCGTCGTAC TCGTTCCGCC CCAGCACCCG
CTGTCCGCCC TGTCAGACGT GAGTTTTAAC GACACATTGG GCTACGATTA CGTCGGCCTG
AATAGCGGTA GTTCTTTGCT GAAACAGCTG AAAGACGCTT CGGATGAACT GGGAAGAGTG
CTGCGCCTGC GCGTACAGGT CAGCAGCTTT GACGGGATTT GCCGCATGAT AGAAGCGGGA
CTGGGTATCA GCGTCCTGCC GGAGGGCGCA ATTCGCCCGG AAGTGCTCGG TACCGGATTG
CGCGCCATCA ATCTCACCGA CGAGTGGGCT TCACGCCAGC TCTGGCTGGG CGTGAAATCC
GGTGCGATTC TGCAACCCGA AGTCGCTAAT CTGCTGACCC ACCTGCGGCA GTGCGGCGCG
TAA
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| Protein sequence | MINPAHFDLQ SLRIFLQVAQ TGSLTKAAEK FHITLSALSK RIAELERTVD CALFIRMPRG
LTLTPAGKEL VNLAGNVLSN VERMASEMND YAVGVRGHVH MWANTSAIIQ FLPQDLASFL
LARPLIRINL EEKLSKTVVT ALAMGDADIG IFADNVGSQG VEKIPYRKDK LVVLVPPQHP
LSALSDVSFN DTLGYDYVGL NSGSSLLKQL KDASDELGRV LRLRVQVSSF DGICRMIEAG
LGISVLPEGA IRPEVLGTGL RAINLTDEWA SRQLWLGVKS GAILQPEVAN LLTHLRQCGA
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