| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2977 |
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| Symbol | |
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| ID | 8133932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3363976 |
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| End bp | 3364875 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866260 |
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| Product | lipid kinase |
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| Protein accession | YP_003018536 |
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| Protein GI | 253689346 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA ATCCAATCAC ACTGCTGATT CTGAATGGGA AGAGCGCGGG TAATGAAGAA
CTCCGTGAAG CCATTGGTGA GTTACGCAAG GATGGCTATA CCCTGCATGT CCGCGTGACG
TGGGAATATG GCGATGCGAA GCGCTATGTA GAAGAGGCAA TCCAGCTCAG CGCGGATAAC
GTAATCGCTG CTGGCGGTGA CGGCACCGTT AATGAAGTCG CCGCAGCCTT AGCGGTGCAG
CCTGAAGCGG TGCGCCCGTG TCTGGGAATT ATACCGCTGG GGACGGCCAA CGATTTCGCC
ACCAGCTGTC AGATACCGAT GGAGATGCAC AACGCCTTAA CGTTGGCGAT CAAAGGCCGT
GCCACTGACA TTGATATCGC CAAAGTGAAC GACGAGCACT ATTTCATCAA CATGGCGACG
GGTGGCTTCG CCACGCGTAT TACCACCGAG ACACCAGCCA AAATGAAGGC GGCGTTGGGG
AGTGCTTCTT ACGTGCTGCA CGCGCTCTTT CGCATGGACA TGCTGCAAGC CGAGCGCTGT
GAGATTCACG GGCCAGATTT TCACTGGGCG GGTGATACGC TGGTCATCGC GGTGGGGAAC
GGTCGTCAGG CTGGCGGCGG GCAGGAACTT TGCCCAGAAG CGCTGGTTAA CGATGGCCTG
CTGGAACTGA GCGTACTGTC AGCAAAAGAG CTGCTGCCCA ATATGCTTCA GGCCTGGTTT
ACCGGCAGCG AAAACCAGAA CATGATTTCC GCTACCTTGC CCTGGCTGGA GATCACCGCA
CCGGACGATA TGACATTTAA TCTGGACGGC GAACCGCTCA CCGCCAAACG CTTCCGTATC
GAAGTGCTTC CTGCGGCCAT CCGCTGCCGG CTGCCACCCC AGTGCCCGCT ACTGGAATAG
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| Protein sequence | MEKNPITLLI LNGKSAGNEE LREAIGELRK DGYTLHVRVT WEYGDAKRYV EEAIQLSADN
VIAAGGDGTV NEVAAALAVQ PEAVRPCLGI IPLGTANDFA TSCQIPMEMH NALTLAIKGR
ATDIDIAKVN DEHYFINMAT GGFATRITTE TPAKMKAALG SASYVLHALF RMDMLQAERC
EIHGPDFHWA GDTLVIAVGN GRQAGGGQEL CPEALVNDGL LELSVLSAKE LLPNMLQAWF
TGSENQNMIS ATLPWLEITA PDDMTFNLDG EPLTAKRFRI EVLPAAIRCR LPPQCPLLE
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