| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2975 |
|---|
| Symbol | |
|---|
| ID | 8133930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 3361002 |
|---|
| End bp | 3361961 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644866258 |
|---|
| Product | Glutathione transferase |
|---|
| Protein accession | YP_003018534 |
|---|
| Protein GI | 253689344 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0435] Predicted glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.341476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTT TAGTGAACGG CAAATGGGTT AACGGCGATG TCGCGGCGGA AGAGATCAAA
AACGGCGCGT TCCACCGTGA AGAAACCAAA TTTCGGCAAA CCGAGCTGGT GCCAGAAGCG
GGTCGTTACC AGCTTTTCGT CTCCTATCTC TGCCCGTGGG CGTCGCGCAC GCTGATTTTC
CGCAAACTGA AAGGGCTGGA GAACATCATC TCGCTTTCCG TTGCCAACCC ACGCATCGCC
GATAACGGCT GGGAGTTTGC CACCCCGCAG GATGCTGGCG AGCACGTGGG CGAGATTCAC
TACCTGCACC AGTTGTACAC CGCCAGCGTA CCCGACTATA CCGGAAAGGT GTCGGTGCCT
GTGTTGTGGG ATCGGGTGGA AGGCCGCATC GTGAACAACG AATCGGCGGA TATCATCCGC
ATGCTGAACA GCGAATTTAA CGACCTGACT GGCAACCACC TCGATTTCTA CCCGTCAGAT
CTGCGCGCAG AGATCGACAG CTGGAACGAA ACCGTGTACC ACAACGTCAA CAACGGCGTG
TATAAAACCG GGTTCGCCAA AACGCAGGAG CACTATAACG ACGCCGTCAC CACGCTATTC
ACCACGCTGG ACGAGCTGGA CGATCATCTG GGCAATCATC GCTATATGCT CGGCGACACG
CTGACCGAGG CCGACTGGCG TCTGTTCGTG ACGCTGGTGC GTTTTGACGT GGCCTACCAC
GGCGCGTTCA AATGTAACCT GAAGCGCATT GCCGACTACC CAAATCTGTC GAACTACCTG
CGCGAACTGT ATCAGTGGCC GGGCGTCGCG GAGACGGTCA ATATCGACCA CATCAAAGCG
GGCTATTACG GTATTGCCTG GCTGAACCCG ACGCAGATTG TACCGGTTGG TCCACTGGTC
GATTTGTCTC AGTCCCATAA CCGTGAAACG GTTGGAAAAT CCCATATCGC CACGCGTTAA
|
|---|
| Protein sequence | MSGLVNGKWV NGDVAAEEIK NGAFHREETK FRQTELVPEA GRYQLFVSYL CPWASRTLIF
RKLKGLENII SLSVANPRIA DNGWEFATPQ DAGEHVGEIH YLHQLYTASV PDYTGKVSVP
VLWDRVEGRI VNNESADIIR MLNSEFNDLT GNHLDFYPSD LRAEIDSWNE TVYHNVNNGV
YKTGFAKTQE HYNDAVTTLF TTLDELDDHL GNHRYMLGDT LTEADWRLFV TLVRFDVAYH
GAFKCNLKRI ADYPNLSNYL RELYQWPGVA ETVNIDHIKA GYYGIAWLNP TQIVPVGPLV
DLSQSHNRET VGKSHIATR
|
|---|
| |