| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2951 |
|---|
| Symbol | |
|---|
| ID | 8133906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 3328254 |
|---|
| End bp | 3329732 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644866234 |
|---|
| Product | magnesium transporter |
|---|
| Protein accession | YP_003018510 |
|---|
| Protein GI | 253689320 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGTG TAAAAAAACT TACCGACCTC CGGCGCCGCA TCTCCCTTCT GCTGTTGGAA
AACAAGGAAC TGGTTGAAGA CATTATCAAC CGGCAGCCGC GCGTTACGGA ACGCGATGGC
TCATCGTTAA GCGACAGCGA CGTATTAAGT AGCAAAATCG GGCTGCGTGA AAAAAGCATC
CTGCTCGACC AAACCGCAGA AATCAGCGAG CTTATCATTG GGCTGCATGC CGCTGACCTT
GCCGATTTGT TAGAGTCTTT ACCGCAGGAT GAACGTCTGG CGCTCTGGCG GCTGATCCCC
ATAGAAAAAC GCGGCCGTGT GTTGATTGAG GCTTCTGACA GTATTTCCGA CGACCTGATC
GGCGATATGC AGGATAAAGA AATCCTGAGA GCCGTTCGAA TACTCGATGT TGATGAGCAG
GCCCAGCTCT CTCGTCTCGT TCCTCGCCAC CTGCTAGGCA GAATACTGAC CTCGCTTGAG
CCGAAGCAGC GCGCGCAGCT CCGTGCCGCC ATCAATTATG ATGAAGACTG CCTCGGGCAC
ATGATGGATT TCAAACTCAT CACCGTGCGC GCCGACGTCA CGCTTGCAGC CGTACAGCGC
TATCTGCGCT ACCGCAAAGC CATCCCCGAA TCGACTGACA AACTGTTCGT TACCGATCGC
AAGAACACAC TGATCGGTGA GCTGTCGCTG GCCAGTATTC TGCTCCACGC GCCTCAAACA
CGGGTTAATG ACGTCATGGA CGATCAGCCG CTGAGGTTTC AGCCTGAGGA TAAAGTCGAA
GAAGCCGCCG GAGCTTTTGA ACGTTACGAT TTAATTTCCA GCGCCGTGGT CGATAGCAAA
GGAAAACTCA TGGGGCGCCT GACGATTGAG GATATCCTCG ACGTCGTGAA CCGGGAAAGC
GACAGTAATC TGCGGCGCTC AGGGGGGTTA ACGCCCTCCG AAGATGTTTA TGCTCCCGTA
TATAAATCCT TCCGCAATCG TTGGGCATGG CTGGCCGTCA ATCTCTGTAC GGCGCTCATT
GCCTCACGGG TTATCGGCCT GTTTGAGCAC ACCTTATCTC ATTTAGTCGC GCTGGCGACA
CTCATGCCGA TCGTGGCCGG AATCGGCGGA AATACCGGCA ATCAGACGAT CACCATGATT
GTTCGCGCGC TGGCGCTGCA TCAGTTAGAA CACGGTAAAA AATCATACCT GCTGCTCAAA
GAACTCGGCG TCGCGCTGGT CAACGGGGTG ATATGGGGCA CGATTATGGG CGTGGTCACC
TTCCTGCTTT ACGGTAGTGC CGCTATGGGT GGCGTGATGA TGCTGGCGAT TCTGCTGAAT
TTACTGCTCG CGGCGCTAAT GGGGGTCGCT ATCCCGCTTA TCATGATGAA ACTCGGCCGC
GATCCGGCAG TCGGCTCCAG CGTCATGATC ACCGCCATCA CCGATACTGG CGGTTTCTTT
ATCTTCCTTG GGCTGGCAAC GCTGTTCCTG CTGCCTTGA
|
|---|
| Protein sequence | MSSVKKLTDL RRRISLLLLE NKELVEDIIN RQPRVTERDG SSLSDSDVLS SKIGLREKSI
LLDQTAEISE LIIGLHAADL ADLLESLPQD ERLALWRLIP IEKRGRVLIE ASDSISDDLI
GDMQDKEILR AVRILDVDEQ AQLSRLVPRH LLGRILTSLE PKQRAQLRAA INYDEDCLGH
MMDFKLITVR ADVTLAAVQR YLRYRKAIPE STDKLFVTDR KNTLIGELSL ASILLHAPQT
RVNDVMDDQP LRFQPEDKVE EAAGAFERYD LISSAVVDSK GKLMGRLTIE DILDVVNRES
DSNLRRSGGL TPSEDVYAPV YKSFRNRWAW LAVNLCTALI ASRVIGLFEH TLSHLVALAT
LMPIVAGIGG NTGNQTITMI VRALALHQLE HGKKSYLLLK ELGVALVNGV IWGTIMGVVT
FLLYGSAAMG GVMMLAILLN LLLAALMGVA IPLIMMKLGR DPAVGSSVMI TAITDTGGFF
IFLGLATLFL LP
|
|---|
| |