Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2934 |
Symbol | |
ID | 8133889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3309551 |
End bp | 3309982 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644866217 |
Product | DoxX family protein |
Protein accession | YP_003018493 |
Protein GI | 253689303 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.173243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGGCA TTCTGGATAG TGTTAATCGT CTGTTAGACA AGCCGGATTT TGGCAAACTG TTTCTGCGCG TATCTTTCAG CGTTTTGATG TTGTTCCACG GTTGGCACAA ACTACACGGT GGCATTGGTT TTATTGAAGG AATGCTGACT AATGCTGGGC TCCCTGCGTT TGTAGGCTAC GGTGTTTATA TCGGGGAAGT GATCATTCCG ATCATGATGA TACTCGGCAT CTTGACGCGG CCTGCCGCGC TGATCTTCTC TTTCACCATG CTTGTTGCTG CATTGCTGGT GCATTCTGGT GACTTCCTTT CTCTGGAAAA AACCGGCGCA TGGGCAGTTG AAGGCGCTGC GGTGTTCTTC TTTGCGGGTA TCGCGATTGC TTTTCTCGGC AGCGGAAAAT ACTCTGTGAT GTCGAATCCA CGCTTGCGCT GA
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Protein sequence | MLGILDSVNR LLDKPDFGKL FLRVSFSVLM LFHGWHKLHG GIGFIEGMLT NAGLPAFVGY GVYIGEVIIP IMMILGILTR PAALIFSFTM LVAALLVHSG DFLSLEKTGA WAVEGAAVFF FAGIAIAFLG SGKYSVMSNP RLR
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