Gene PC1_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2934 
Symbol 
ID8133889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3309551 
End bp3309982 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content50% 
IMG OID644866217 
ProductDoxX family protein 
Protein accessionYP_003018493 
Protein GI253689303 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.173243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGGCA TTCTGGATAG TGTTAATCGT CTGTTAGACA AGCCGGATTT TGGCAAACTG 
TTTCTGCGCG TATCTTTCAG CGTTTTGATG TTGTTCCACG GTTGGCACAA ACTACACGGT
GGCATTGGTT TTATTGAAGG AATGCTGACT AATGCTGGGC TCCCTGCGTT TGTAGGCTAC
GGTGTTTATA TCGGGGAAGT GATCATTCCG ATCATGATGA TACTCGGCAT CTTGACGCGG
CCTGCCGCGC TGATCTTCTC TTTCACCATG CTTGTTGCTG CATTGCTGGT GCATTCTGGT
GACTTCCTTT CTCTGGAAAA AACCGGCGCA TGGGCAGTTG AAGGCGCTGC GGTGTTCTTC
TTTGCGGGTA TCGCGATTGC TTTTCTCGGC AGCGGAAAAT ACTCTGTGAT GTCGAATCCA
CGCTTGCGCT GA
 
Protein sequence
MLGILDSVNR LLDKPDFGKL FLRVSFSVLM LFHGWHKLHG GIGFIEGMLT NAGLPAFVGY 
GVYIGEVIIP IMMILGILTR PAALIFSFTM LVAALLVHSG DFLSLEKTGA WAVEGAAVFF
FAGIAIAFLG SGKYSVMSNP RLR