| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2926 |
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| Symbol | |
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| ID | 8133881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3298925 |
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| End bp | 3300943 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866209 |
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| Product | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase |
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| Protein accession | YP_003018485 |
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| Protein GI | 253689295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA TCGTATTTGC CTACCATGAT ATCGGCTGCG TCGGCCTTGA GGCGCTAAAG
CTTGCCGGTT ATGAGATTCA GGCGGTGTTC ACGCACAGCG ATGCACCGGG TGAGAACCAC
TTCTATGCGT CAGTGGCGAA AGCGGCAGCC GAGATGGATG TGCCAGTGTT CGCACCGGAA
GACGTTAACC ATCCGCTCTG GGTGAACCGT ATTCGGGAAC TGGCACCGGA TGTGATTTTT
TCCTTCTATT ACCGCACGCT GTTAAGCGAC GACATTCTCC AGTTGCCGTC GTTTGGCGCT
TTCAATCTGC ACGGGTCGCT GCTGCCACGC TACCGTGGGC GGGCACCGGT GAATTGGGTG
CTGGTGAACG GTGAAACGCA GACGGGCGTG ACGCTGCACA AGATGGTGTC ACGTGCCGAT
GCTGGCGATA TCGTTGCTCA GTCCGTGGTG GAGATTGACG ATGAAGATAC CGCGCTGACG
CTGCATGGAA AATGTCGTAC TACCGCTGCG GCTTTACTGG CGCAGCAGCT CCCGCTGATC
CGCTCGCGTG AGATTATGCT GACGCCGCAG GATGAGAGTC AGGCCAGCTA TTTCGGACGT
CGTACCGCGG CAGACGGGCT GATCGATTGG CAAAAAAGCG CCCGTGAGAT CAACAATCTG
ATCCGCGCGG TGACGGAGCC GTATCCGGGG GCGTTTACGT TCCTCGGCGA GCGCAAAGTG
GTTATCTGGC GTGCCCGCGT GCTGAAAAAC GACAGTGTGA AAGCCAATGG CGTGAAGCAG
GAACCAGGCT CGATTATCTC GACATCGCCG CTGGTCGTGT CCTGCGGTGA AGATGCACTT
GAGATCGTCA GCGGACAGAG CGAGTCCGGG CTGTATATGT CGGGTAGCCG ACTGGCGGCG
GAAATGGGCA TGGTGCCACA GGCGAAACTG GGTAACCTTG CCAGCCGTGT GCAACGACGC
CGCACGCGCG TCCTGATCCT CGGCGTGAAC GGTTTTATCG GTAATCACCT GACCGAACGC
CTGCTGCGCG ATGATCGCTA TGAAATTTAC GGACTGGATA TCAGTTCGGA TGCCATCGCC
CGTTTTCTTG GCGATCCGCG TTTCCATTTT GTGGAAGGCG ATATCAGCAT TCATAACGAA
TGGATCGAAT ATCACATTAA GAAATGCGAT GTCATTTTGC CGCTGGTGGC GATTGCAACG
CCTATCGAAT ACACCCGTAA TCCACTGCGC GTGTTTGAGC TGGATTTTGA AGAAAACCTG
AAAATCGTGC GCGACTGCGT GCGCTACAAC AAACGCATCG TTTTCCCGTC CACCTCAGAA
GTGTACGGCA TGTGTGATGA CAAAGAGTTT GATGAAGATA CCTCACGCCT GATTGTCGGG
CCGATCAACA AGCAGCGCTG GATTTACTCT GTGTCCAAGC AACTGCTGGA TCGGGTGATT
TGGGCGTACG GCGCGAAAAA TGGCCTGCGT TTCACGTTGT TCCGTCCGTT TAACTGGATG
GGACCGCGTC TGGATACGCT GGACGCCGCG CGAATCGGCA GTTCTCGCGC CATTACTCAA
CTGATTCTCA ATCTGGTGGA AGGATCGCCG ATCAAGCTGG TGGACGGCGG AGCACAGAAA
CGCTGCTTTA CCGACATTCA CGATGGTATT GAGGCGTTGT TCCGTATTAT TGAAAACCGC
AACGGTCAGT GTGACGGGCA GATTATCAAC ATCGGCAATC CGCACAATGA AGCCAGTATC
CGCGAACTGG GCGATATGCT GCTGACCAGC TTTAATGCCC ACCCGCTGCG CGACCGCTTC
CCGCCGTTTG CCGGATTCAT TGAAGTGGAA AGCAGCAGCT ATTACGGCAA AGGGTATCAG
GATGTGGCGC ATCGCACGCC GAGCATTCGT AACGCCAAGC GCCTGCTGGA ATGGGAACCG
ACGGTGAAGA TGGAGCAAAC CGTCGCGGAA ACGCTGGACT ATTTCCTGCG TACCGTTGAT
CCCCAGCACG CCGATAACGT CACGGATACG CAGGGATGA
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| Protein sequence | MKAIVFAYHD IGCVGLEALK LAGYEIQAVF THSDAPGENH FYASVAKAAA EMDVPVFAPE
DVNHPLWVNR IRELAPDVIF SFYYRTLLSD DILQLPSFGA FNLHGSLLPR YRGRAPVNWV
LVNGETQTGV TLHKMVSRAD AGDIVAQSVV EIDDEDTALT LHGKCRTTAA ALLAQQLPLI
RSREIMLTPQ DESQASYFGR RTAADGLIDW QKSAREINNL IRAVTEPYPG AFTFLGERKV
VIWRARVLKN DSVKANGVKQ EPGSIISTSP LVVSCGEDAL EIVSGQSESG LYMSGSRLAA
EMGMVPQAKL GNLASRVQRR RTRVLILGVN GFIGNHLTER LLRDDRYEIY GLDISSDAIA
RFLGDPRFHF VEGDISIHNE WIEYHIKKCD VILPLVAIAT PIEYTRNPLR VFELDFEENL
KIVRDCVRYN KRIVFPSTSE VYGMCDDKEF DEDTSRLIVG PINKQRWIYS VSKQLLDRVI
WAYGAKNGLR FTLFRPFNWM GPRLDTLDAA RIGSSRAITQ LILNLVEGSP IKLVDGGAQK
RCFTDIHDGI EALFRIIENR NGQCDGQIIN IGNPHNEASI RELGDMLLTS FNAHPLRDRF
PPFAGFIEVE SSSYYGKGYQ DVAHRTPSIR NAKRLLEWEP TVKMEQTVAE TLDYFLRTVD
PQHADNVTDT QG
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