| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2923 |
|---|
| Symbol | |
|---|
| ID | 8133878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3296009 |
|---|
| End bp | 3296350 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644866206 |
|---|
| Product | small multidrug resistance protein |
|---|
| Protein accession | YP_003018482 |
|---|
| Protein GI | 253689292 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.571329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTATC TGCTGGTTGC TATCGTCTGC CTGCTGACCA GTCTGGGACA ACTGTGCCAG
AAACAGGCTG CTGAGTGCTG GCGGCGTTTG CCGCCAGATC GACGCCAGCG CGTGACGCTG
GGGTGGCTGA TGCTGGCGGC TGTGTTGCTG GGTATTGGGC TGCTGCTGTG GCTTGTGGTG
TTGCAGCATA TTCCGCTTGG CGTGGCGTAC CCGCTGCTGA GCATCAATTT TGTTCTGGTT
ACGCTGCTGG CGCACTATTG GTTTGGTGAG CGTGTGGACA AGCACCACTG GTGGGGCATT
GCGCTGATTG TCACCGGTAT CTATCTGATG CAGGGGGGAT GA
|
|---|
| Protein sequence | MSYLLVAIVC LLTSLGQLCQ KQAAECWRRL PPDRRQRVTL GWLMLAAVLL GIGLLLWLVV
LQHIPLGVAY PLLSINFVLV TLLAHYWFGE RVDKHHWWGI ALIVTGIYLM QGG
|
|---|
| |