| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2908 |
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| Symbol | |
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| ID | 8133863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3282319 |
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| End bp | 3283197 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644866191 |
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| Product | Taurine catabolism dioxygenase TauD/TfdA |
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| Protein accession | YP_003018467 |
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| Protein GI | 253689277 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTCAT TCACTTTAGA AGATCGATTT AATTATCAAC CTTTAACCAA TTCTCAAGGT
GAAATCTACC CTTTTGGCGT GCGTATTGAA CCTAAACAGT CAGGTGTGCA TATTGGCGAA
TTATCGCCTA ACTGGCTGCG TACACTCGTA GAGAACCAAC AATTAGTGAT ACTGCGGGGC
TTTGATAGCT TTACGAGTGC AGAAAATTTA ACAACATACT GCGCCGCCAT GGGTGACATT
ATGCAATGGC CGTTTGGCGC CGTGTTGGAA CTGGTTGAAC AGCCCGATGC TACCGATCAT
ATCTTTGCTA ACAACTATGT CCCCTTGCAC TGGGATGGCA TGTACCTTAA GACCGTGCCT
GAGCTCCAGG TCTTTCAATG CGTCTCAGCG ATTGGCGAAG GGCAGGGTGG GCGAACCACG
TTTTCTAGTA CCACCACGGC GTTACGTCTG GCATCACCCG AAACCAAAGC GCTGTGGCAG
CGTGCAACTG GTCAGTATCA GCGTGCCGTC GAGCTATACA GCAGTACTGC ACTGGCCCCT
ATTATAGAGC AGCACCCCTA CCGCACATAT CCCGTCATTC GCTTTTGTGA GCCGCCGATT
GCTGGCGATA AAGAATTCTT GAACCCATCC ACTTATCATT TCTCAGGCAT TGAACCTGAA
GAGCAAGAGC TATTACTCAG CAGTTTGCAA CAAGCCTTAT ATGATCCACG GGTTCAATAT
GCGCATCAGT GGCAAAGCGG CGATATTGTC ATTGCAGATA ACTACTCGTT ATTACACGGT
CGTGAATCTT ATGCCAGCCA GAGTGGCCGT CATCTACGTC GGGTGCACAT CCATGCGAAA
CAGCCGCTGA CTAACCCACA TTTGGTGCAA CCGTCATGA
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| Protein sequence | MDSFTLEDRF NYQPLTNSQG EIYPFGVRIE PKQSGVHIGE LSPNWLRTLV ENQQLVILRG
FDSFTSAENL TTYCAAMGDI MQWPFGAVLE LVEQPDATDH IFANNYVPLH WDGMYLKTVP
ELQVFQCVSA IGEGQGGRTT FSSTTTALRL ASPETKALWQ RATGQYQRAV ELYSSTALAP
IIEQHPYRTY PVIRFCEPPI AGDKEFLNPS TYHFSGIEPE EQELLLSSLQ QALYDPRVQY
AHQWQSGDIV IADNYSLLHG RESYASQSGR HLRRVHIHAK QPLTNPHLVQ PS
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