| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2901 |
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| Symbol | |
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| ID | 8133856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3276793 |
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| End bp | 3278097 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644866185 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_003018461 |
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| Protein GI | 253689271 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA ATAGAATAGG AAGTCATATT GTTGCAGTTA TTGGGTTGGG CTATATAGGC
CTACCTGTAG CTTGTGAGTT TTCTAAATAC TTCAATGTTA TAGCCTATGA TTGCAACCGA
ATCAGAGTTG AACAGCTGAG TAACAATATA GACTCAACTG GGACAAATTC ATACGGATGT
AGGAATGAGA AAAACATAAA ATGGACTAAC GATGAATATG ATATTGAATT TGCTGATTTT
TTTATAGTTT GCGTTCCTAC ACCTGTCGAT ATAAACAACA AACCAGACAT AACATGTCTG
ATAAAAGCAA CAAAAACTGT TGGTCATTAT TTAAGAAAAA ATAGCATAGT TGTATATGAG
TCTACTGTAT CGCCGGGAAC AACTGAAGAA GTATGCCAAC CACTTCTTGA GAAATATGCA
CAACTGAAAT CTGGAAAAGA TTTTTTTATT GGATTTAGTC CTGAAAGATT GTGCCCAGGG
GATGATCTTC ACTCCTTAGT AAATACAGAT AAAATTGTAT CATGTGCTCA TGAAAACGGA
TTGCAGAAAA TTTTCATGGT ATATAATCAT GTGTATAAAA AAGGAATACA CAAAACCTCA
AGTATTAGAA GTGCAGAGGC TGCTAAAATA TTAGAAAACA TACAAAGAGA TGTTAATATT
GCACTAATCA ATGAAGTGCA TGAGGTTTTT CAAAAAGATA ACATAGATAC TTATGAAGTT
ATACGTCTAG CTTCAACAAA ATGGAATTTT GGGAAATACT TCCCCGGTCT TGTTGGAGGT
CATTGCATAA GTGTTGACCC ATACTATTTT ATTGATTATG CAAATAAATC TGGGCATCCT
GTCCCATTAG TAAGTGTATC GAGAAGGATT AATGAGGACA AAAAAGACAT TATCATTGAG
AAAGTCAATT TATTCATAAA AAATAATAAA ATTACGAACC CTAAGATTGC CATCTTTGGA
GTTACGTATA AAGAAAACTG TACAGATACG AGGAATTCGA AATCTTTATT GATTTATCAA
TCTCTTGTTA ATAGTGGGTA TGAGGTTCAT TTAAATGATA TTAAATTACT GAACAAATCG
AAATGCACTA CTAATTACGA TATAAATCTC ACGTCGCTCG AAGACATATC TGGCTGTGAT
ATTCTTATCA TTTGCGTTGC TCATGATGAG TATAAAAGAA TGATTCTTTC AGACTATAAA
AAAATTATTA ACAATGAGTC TTTGATTATA GATATGAAAA ATGTAATCAA TGAATCGCTA
AACTTACAAC TCTCTGAGCA TAAGATTCAT TTAATTAAAG GATAA
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| Protein sequence | MAENRIGSHI VAVIGLGYIG LPVACEFSKY FNVIAYDCNR IRVEQLSNNI DSTGTNSYGC
RNEKNIKWTN DEYDIEFADF FIVCVPTPVD INNKPDITCL IKATKTVGHY LRKNSIVVYE
STVSPGTTEE VCQPLLEKYA QLKSGKDFFI GFSPERLCPG DDLHSLVNTD KIVSCAHENG
LQKIFMVYNH VYKKGIHKTS SIRSAEAAKI LENIQRDVNI ALINEVHEVF QKDNIDTYEV
IRLASTKWNF GKYFPGLVGG HCISVDPYYF IDYANKSGHP VPLVSVSRRI NEDKKDIIIE
KVNLFIKNNK ITNPKIAIFG VTYKENCTDT RNSKSLLIYQ SLVNSGYEVH LNDIKLLNKS
KCTTNYDINL TSLEDISGCD ILIICVAHDE YKRMILSDYK KIINNESLII DMKNVINESL
NLQLSEHKIH LIKG
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