| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2877 |
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| Symbol | |
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| ID | 8133832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3255289 |
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| End bp | 3258702 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644866164 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_003018440 |
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| Protein GI | 253689250 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAGT CTCTCAATTT CGAAATGTTG CGTAGCCAGT GGCCAGAACT GGCGGAACTT
GCATGTATGG CAGAACGCTA TGTTCACGCC GATCCGGAAA GCAGTCTAGT GAAGCTGCGC
AACTACACCG AGTTGATGGT GCGCTGGTTG TATCGTCAGG AACGGTTACC GGAAGGGATT
AAAGCCAGCC TGTATGACTT GATGGGGGCA GATGTCTTTA CCAGCATGAT GCCGGAAGCC
ATCATCATGA AAATGGATGC GTTGCGTATT CACGGCAACC GCGCAGCGCA CGGCGGACGT
ATCAAAGCCA AAGATACCTA CTGGCTGCTT AAGGAAGCAT ATTTACTAGG TGTTTGGCTA
TATGTTCGTT ATGCCCACGG TAATGTTGAT GACTGCCCCA AATTCTCTCT CCCTCCGTTA
ACGCAATCTT CAGGTCGTGC AGATGAAAAA CGCCTGGAAG ACGCAATCAG AGCGCAGGAT
GAAAGCCGTG AACGCGAACT GGCATTACAA CGCGCACTAC AGCAAGAGCA GGAAAAGGCC
GAACACCTCA CTCAGCGCCT GAGTGAAGCC AGAGCGCGTA ACCAGCATGT TGCTGATATC
CTCTCTATTG ATGAAGCGGA AACCCGTCGC CGCCTGATTG ACTCCCGCCT GCTTGCTGCT
GATTGGAATG TAGGCGAAGA ACTTAAAAAT ACCGATCAGG TTACGCAGGA ACACCCTGTT
AAAGAACAGC CTACTATGAC CGGGGATGGT TATGCGGATT ATGTCTTGTG GGATGAGGCA
CACAAACCGC TAGCGGTGGT GGAAGCTAAA AAAACCAGCG TCAATGCCGA ACAGGGGCGA
ATGCAGGCCC GGTTATATGC GGACTGGCTG GAGAAAGAAT ACGGTCAGCG ACCGGTCATC
TTCTACACTA ACGGCTACGA TATTTGGCTG TGGGACGACA ACAAAACTCA TGGCTATCCA
CCGCGTCGGG TATTTGGCTT CTACAGTAAA GAAAGCCTGC AATATCTTAT TCAACAACGT
GAAACCCGTT TGCCCTTAAA TAGTGTGCCT CACGTTAAAG ACAAAGAGGG CAAAGCGGTT
GCTGGACGTT TGTATCAGCT TGAAACCATT GCCCGAGTCA GCGAACGCTT CACCGACAAA
TACCGGCAGT CGCTAATTGT TCAGGCGACT GGGACGGGTA AAACGCGTGT GGCGATTGCG
CTCAGTAAGC TAATGATTGA TGCCCGTTGG GTAAAACGAG TCCTGTTTCT TTGTGACCGC
AAAGAGTTAC GTAAACAGGC GGCGAATGCT TTCAATCAAT TTACCAATGA GCCATTGTAT
GTGGTCGGGA AATCGAAGAA AGCAGACAGG CAGAATGCCA GGATCTATAT CGCTACTTAC
CCTGGCATGA TGAAAATCAT GGATCATTTT GATGTCGGCT ATTTCGATCT GATCATTGCT
GATGAATCTC ACCGTTCGAT CTACAACGTT TACGGCGATC TGTTTAAGTA TTTTGATGCG
ATCCAGATTG GCTTGACGGC AACGCCGATC GACATGGTGA GTAAAACCAC TTTCGGTCTG
TTCGGTTGCG AAGGGCGCAT TCCTACTGCC AACTACAGCC TGGAAGATGC TATTGCAGAC
AACAATCTGG TGCCTTATGA GGTTGTTACG CACACTACGG AATTCCTGCG CGAAGGTATT
AAACGGGAAA AGTTAAGCGA TGCGCAAATC CGTGAGTTGG AAGAGCAGGG TATCGATCCC
AATACACTGG AATTTGAAGG CAAAGCGCTG GATGAGGCGA TCTACAACAA AGATACCAAC
CGCCATATCC TGCGTAATCT GATGGAAAAT GGCCTGAAAG ATCGGGATGG TCAACTTCCC
GGAAAGACCA TCATTTTTGC CCGCAACCAT AGACACGCGC TTTTATTGAA TAAATTGTTT
GACGACATGT ACCCGCAATT TGCCGGACGT TTCTGTCAGG TCATCGACAA CTACGATCCT
CGCGCTGAGC AATTAATTGA TGATTTTAAA GGGTTGGATG AAAGCACCAA CAAAGAGCTT
ACCATCGCGA TCTCCGTTGA TATGCTAGAT ACCGGCATTG ATGTCCCGGA AATTGTGAAT
CTGGTCTTTG CCAAGCCAGT CAAATCGAAA GTGAAGTTCT GGCAGATGAT TGGTCGAGGT
ACGCGCCTTT GTCCTGTGCT GCTCGGCAAC GATGACGACG GCAAGCCGCT GGATAAACAG
AAATTCCGCA TTTTCGATCA CTGGGGCAAT TTTGAGTATC ACGAGCTACA TACCGAAGAG
GCCGAAGTCA CCGTGACTAA ATCGCTAGCT CAAAAACGTT TCGAAGCGTG GGTGATGCTG
GGGGGCGCGG CACAGCGTAA ATTCGACAAG CAGGCGGTGA ATTTAGTAGC TCGCCAGCTC
CGTGAGCAAA TCAACTCTCT GGATGAAAAA TCAATTGCCG TACAGGAAAA GTGGCAGCAA
AAAGCGCAGT ACAGCGATGA AAAGGTGCTA CGTCAGCTTT CCCCGAAAAC ACAGCAGGAT
CTGTTATCCG TTCTGGCCCC GCTGATGCAG TGGCTGGACG TGCGCGGGCA AAGCGACGCC
ATGCGTTTCG ATATGGATAT TCTGGCGGCA CAAACCGCCC GTTATACTAA CCCGGAGGAG
CTGGATGTGC TCTGGCCGGT AATCGTGGAG AAAGTGGAGC GTCTGCCGCC CCATCTGGCA
CAGGTACAGC AGCAGGGACA GCGGATTAAT CAGCTTCGCG ACTTAGGCTG GTGGAAGCAG
GCAAGTCTGG AAGAGCTGGA GGATATCCGC ATTCATCTGC GTGGTATTAT GCACCTGATG
GAAAAAGATC CGACTCCCCG TCCCAATCCG GTACAGGTGG ATATCACTGA AGATGCAGGC
CAGATTCAGA CGGAAACCCG CAAAACCAAC ATCCGCTCGA TTGATTTCAA ACTTTATCGC
CAGCAGGTTC AGGGCGCGTT GGAGCCGTTG TTCCAGCAAA ATCCAGTACT GAAGAAAATC
CGCAACGGCG AGCCGGTAAC GCAGAGTGAG CTAGATGAGC TGGCAAAGCT GGTTCTTATC
CAGAACCCGA ATGTTGATAT CCGGGCGCTG AAAGAGTTCT ACCCGCAGGC AACTTCAAGC
CTGGATAAAC TGTTACGTAC CATAATCGGG ATGGACAGTG ACGCGGTGGA AGTGCGTTTT
GCACAGTTCG CCGCTGACAA CAGCCTGACC AGCCAACAAT TGCGCTTCCT GTCGCTGCTG
AAAAATCATA TCCGTGATTA CGGCACCATT GAAATGCGGC AGCTCTTTGA ACAGCCGTTT
ACGCATATCC ACAACGAAGG CGTTACTGGC GTATTCCCGG ATGTAGAGCA GATCGCCCGG
TTGCAAAAGA TAGTCGAAGA GTTGGGTGTT GTGACCGACA CCGTGAAGGT ATAA
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| Protein sequence | MEQSLNFEML RSQWPELAEL ACMAERYVHA DPESSLVKLR NYTELMVRWL YRQERLPEGI
KASLYDLMGA DVFTSMMPEA IIMKMDALRI HGNRAAHGGR IKAKDTYWLL KEAYLLGVWL
YVRYAHGNVD DCPKFSLPPL TQSSGRADEK RLEDAIRAQD ESRERELALQ RALQQEQEKA
EHLTQRLSEA RARNQHVADI LSIDEAETRR RLIDSRLLAA DWNVGEELKN TDQVTQEHPV
KEQPTMTGDG YADYVLWDEA HKPLAVVEAK KTSVNAEQGR MQARLYADWL EKEYGQRPVI
FYTNGYDIWL WDDNKTHGYP PRRVFGFYSK ESLQYLIQQR ETRLPLNSVP HVKDKEGKAV
AGRLYQLETI ARVSERFTDK YRQSLIVQAT GTGKTRVAIA LSKLMIDARW VKRVLFLCDR
KELRKQAANA FNQFTNEPLY VVGKSKKADR QNARIYIATY PGMMKIMDHF DVGYFDLIIA
DESHRSIYNV YGDLFKYFDA IQIGLTATPI DMVSKTTFGL FGCEGRIPTA NYSLEDAIAD
NNLVPYEVVT HTTEFLREGI KREKLSDAQI RELEEQGIDP NTLEFEGKAL DEAIYNKDTN
RHILRNLMEN GLKDRDGQLP GKTIIFARNH RHALLLNKLF DDMYPQFAGR FCQVIDNYDP
RAEQLIDDFK GLDESTNKEL TIAISVDMLD TGIDVPEIVN LVFAKPVKSK VKFWQMIGRG
TRLCPVLLGN DDDGKPLDKQ KFRIFDHWGN FEYHELHTEE AEVTVTKSLA QKRFEAWVML
GGAAQRKFDK QAVNLVARQL REQINSLDEK SIAVQEKWQQ KAQYSDEKVL RQLSPKTQQD
LLSVLAPLMQ WLDVRGQSDA MRFDMDILAA QTARYTNPEE LDVLWPVIVE KVERLPPHLA
QVQQQGQRIN QLRDLGWWKQ ASLEELEDIR IHLRGIMHLM EKDPTPRPNP VQVDITEDAG
QIQTETRKTN IRSIDFKLYR QQVQGALEPL FQQNPVLKKI RNGEPVTQSE LDELAKLVLI
QNPNVDIRAL KEFYPQATSS LDKLLRTIIG MDSDAVEVRF AQFAADNSLT SQQLRFLSLL
KNHIRDYGTI EMRQLFEQPF THIHNEGVTG VFPDVEQIAR LQKIVEELGV VTDTVKV
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