| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2865 |
|---|
| Symbol | |
|---|
| ID | 8133819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3240674 |
|---|
| End bp | 3241087 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644866153 |
|---|
| Product | lipoprotein, PulS/OutS family |
|---|
| Protein accession | YP_003018430 |
|---|
| Protein GI | 253689240 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01004] lipoprotein, PulS/OutS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.265111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAT CTCTGTCTAA ATTTTCCGCG TTAACGCTGC TTTGCGTCAC GCTGGCCGGG
TGCCAACAAA CAGGAACGTC TGCCCACAAA GGAACGGTGG CAGGCCAGTC TTCTGCGGTA
ACGGTCTCTC CTAACGATCA ACTGAATCAG CTGTCGTCGC TGGTTGCAGC TACTCGCTAT
CTCAAATCAA AATGTAATCG CAGCGATCTT CCCGATGATG CGACGGTTAT GAATGTTGCG
TTGACGGTGG CGAAACAAAG AGGCTGGAAT GTCGCGAGCT ACCAGGCTTT ACCGCAGCGC
AGTGAAAGCC TGTATCAAGG ATTATTAAAA GATAGCACGC CAAAAGAGAC GCAGTGTTCG
GAATTTAACC GTACGCTGAC GCCGTTTATC GATGCTATTC GCAGTCGCGG CTAG
|
|---|
| Protein sequence | MSLSLSKFSA LTLLCVTLAG CQQTGTSAHK GTVAGQSSAV TVSPNDQLNQ LSSLVAATRY
LKSKCNRSDL PDDATVMNVA LTVAKQRGWN VASYQALPQR SESLYQGLLK DSTPKETQCS
EFNRTLTPFI DAIRSRG
|
|---|
| |