Gene PC1_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2864 
Symbol 
ID8133818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3240105 
End bp3240677 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID644866152 
Productgeneral secretion pathway protein 
Protein accessionYP_003018429 
Protein GI253689239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.839881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAACG CACCGGACGC ACAAACACAC TCACAGCCAG CGCTGCTTGC CAAATACCCC 
ATGCCCGGGT ATTTGATGGT TATTTATGCT CTGCTTTTTA TCGCACTTGG CTGGTTCAGC 
CATCAGCGCT GGGGGAGTTC TACTTCACCT GCCGTCGCTT TGGCTGCTCA AGCCGCTACC 
TTGCCTGCGG CAGAAGGACA AGCACCAGCC GCACCCGTGG CGACACCACC TCAGCAAGAA 
GAAGCTCATG TCGATGCGCC TGCGCTGCCA GAGAAAAGAA CCACATTGCC GTTACCTGCC 
ATCAGCAATG GTGAGGTTCC ACCGCTGACC TACAGCGCAC ACGTTTACAC GTCGGATGAA 
GCCAAGCGCA GTATCACGCT CAACGGCCTG CAATTCCGTG AAGGCGATTC GCCAATAGAA 
GGGTTGACCA TCGAACAAAT CCAACAAGAC ATGACCATTT TCAGCGTCGA GGGTGAAGTG 
TTTATTTTGG AGGCGTTGGA GGATTGGCCA GGCGGAAAAT TCAATGAGAA TGAACGTTCC 
GCCGCCGATG AAAGTGGAAG CGCCGCGCCC TAG
 
Protein sequence
MDNAPDAQTH SQPALLAKYP MPGYLMVIYA LLFIALGWFS HQRWGSSTSP AVALAAQAAT 
LPAAEGQAPA APVATPPQQE EAHVDAPALP EKRTTLPLPA ISNGEVPPLT YSAHVYTSDE 
AKRSITLNGL QFREGDSPIE GLTIEQIQQD MTIFSVEGEV FILEALEDWP GGKFNENERS 
AADESGSAAP