Gene PC1_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2850 
Symbol 
ID8133804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3224568 
End bp3225314 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content57% 
IMG OID644866138 
Producttype II secretion system protein N 
Protein accessionYP_003018415 
Protein GI253689225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA AATCCGGCAT TGGCGCAGGC GTCGCTATGG TTCTGGCCTA TGGGGTGTTC 
CTGGCGTGCT ATGCGCCTGC CCGCTTGCTC ACGGCGGTGC CGCTGCCGAC CGGAATGGTG 
GTTGCAGAAG CCGCCGGAAC GCTATGGCAG GGGAACCTGC AACGGTTTAG CTGGCGCACG 
TTAATGTTGG ATGATGTGCG GTGGAATATC ACCTTCTCGG GTTTTATGCC TGCACTAGAA 
ATTGCCTTCC ACAATCCGGA GGGCATTGAA GGCCGTGGGA TCATTCGTGG TTGGCAGCAG 
CCGCAGTTTT ATCAATGGCA GCTTTCGGTA CCCGCGGGCT ATTTATTCAG CCGCATGCGT 
TTTATCGTGC CAATCGGGGC AGAAGGAAAC GTGCAACTGA ACCTGCAAGA AGCGACGGTT 
GACCGTTCTG GCTGCCAGTC GCTCGATGCC AACATCAGTT GGCCGGGCGC TCGGGTGAAC 
ACCCCGCTGG GTGGGCTAAT GCTCGCAACA CCTCAGGCCA CGTTACGCTG CCAGCAAGGG 
GCGCTTGAGG CAAACCTGCG GCAGACTTCT TCGCATCTAC AATTGTCCGG CAAAGGCAGC 
GTTACCCCAA AAGGTGAATA TCGTTTTACG GGGCAACTTA GCAGCGGAAA CGACTTACCC 
GCGACCATGA AAAAGTTACT GGCGACCACT GGCAAAGCAG ACGAACAAGG CGCCAGAACG 
CTGAATTTTC AGGGGCGTCT GTTGTAA
 
Protein sequence
MKLKSGIGAG VAMVLAYGVF LACYAPARLL TAVPLPTGMV VAEAAGTLWQ GNLQRFSWRT 
LMLDDVRWNI TFSGFMPALE IAFHNPEGIE GRGIIRGWQQ PQFYQWQLSV PAGYLFSRMR 
FIVPIGAEGN VQLNLQEATV DRSGCQSLDA NISWPGARVN TPLGGLMLAT PQATLRCQQG 
ALEANLRQTS SHLQLSGKGS VTPKGEYRFT GQLSSGNDLP ATMKKLLATT GKADEQGART 
LNFQGRLL