Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2848 |
Symbol | |
ID | 8133802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3222016 |
End bp | 3223041 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644866136 |
Product | Luciferase-like monooxygenase |
Protein accession | YP_003018413 |
Protein GI | 253689223 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAGA TTGGCTTTTT ATCATTCGGC CACTGGGCAC CATCGCAGCA GTCTGGCACG CGTTCCGCGG CTGACGCCTT GCTGCAATCT ATCGATCTTG CCGTCGCCGC TGAAGAACTG GGCGCTGACG GCGCCTATTT CAGAGTGCAC CACTTTGCCC GCCAGTTGGG TTCGCCTTTC CCATTGCTGG CCGCCATTGG GGCAAAAACC AAAAACATTG AAATTGGCAC CGGCGTCATC GACATGCGTT ACGAAAACCC GCTGTACATG GCTGAAAACG CCAGCGCCGC CGATCTGATC TCTGGCGGAC GTTTGCAGCT CGGCATCAGT CGCGGCTCGC CTGAACAGGT AATCGATGGC TGGCGCTATT TTGGCTATCA GCCTACGGAA GGGGAATCTG ACGCAGAGAT GGCACGACAT CATACCGAAG TGCTGTTGGA TGTGTTGCGT GGCGAAGGGT TTGCAAAACC GAACCCACAG CCCATGTTCC CGAATCCACC AGGCCTGTTG CGTCTGGAGC CCTATTCTGA GGGATTACGT GAACGTATCT GGTGGGGAGC TGGCTCGAAT GCCACGGCGG TATGGGCAGC GAAACTGGGC ATGAATCTGC AAAGCTCCAC GCTAAAAGAT GATGAAACCG GTGAACCTTT TCATATCCAG CAGGCACAGC AAATTCGTGC CTATCGGGCT GCCTGGGCTG AAGCTGGGCA TACGCGTACG CCACGCGTGT CCGTCAGCCG CAGTATTTTT GCACTGGTAG ATCATCGCGA TCGCGCCTAT TTTGGCGGAA GCAGTAACGA CAGCGACAAG GTAGGTTTCC TGGATGAAAA AACGCGCGCG ATTTTCGGGC GCAGCTATGC CGCCGAGCCG GAAGCCCTTA TCCAGCAGTT AAAACAGGAC GAAGCTATTG CCGAAGCGGA TACGCTATTG CTAACGGTGC CGAATCAACT GGGCGTCGAT TACAATGCGC ATGTTATCGA ATCAATTCTG AAGCATGTCG CACCCGCGAT GGGGTGGAGA GAGTAA
|
Protein sequence | MKKIGFLSFG HWAPSQQSGT RSAADALLQS IDLAVAAEEL GADGAYFRVH HFARQLGSPF PLLAAIGAKT KNIEIGTGVI DMRYENPLYM AENASAADLI SGGRLQLGIS RGSPEQVIDG WRYFGYQPTE GESDAEMARH HTEVLLDVLR GEGFAKPNPQ PMFPNPPGLL RLEPYSEGLR ERIWWGAGSN ATAVWAAKLG MNLQSSTLKD DETGEPFHIQ QAQQIRAYRA AWAEAGHTRT PRVSVSRSIF ALVDHRDRAY FGGSSNDSDK VGFLDEKTRA IFGRSYAAEP EALIQQLKQD EAIAEADTLL LTVPNQLGVD YNAHVIESIL KHVAPAMGWR E
|
| |