Gene PC1_2845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2845 
Symbol 
ID8133799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3218810 
End bp3219580 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content56% 
IMG OID644866133 
ProductABC transporter related 
Protein accessionYP_003018410 
Protein GI253689220 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACGA TCAGGTTATC GACAGAAAGT CTGGTGTATG GTTACCGGCA GGGGCAAGGT 
TTTTTTGCAC CGCTGAATTT GTGTTGTCGG GAAGGGGAAA TCACGGCGAT TCTGGGCGCG
AACGGCAGAG GAAAAACGAC GCTGTTGAAT ACGCTGATGG GACATTTATC ACCGCTTTCC
GGGACGATCC AGCGGGATGG ACACATTGGC TTTGTGCCGC AGATATTTAC ACCACCGTTT
TCCTACAGTG CTCTGGATAT GGTGCTGATG GGGCGTGCGG CGCATGTGCG ACTGTTTGCC
ATGCCTTCCG CGCATGACAT CACCGTTGCC CGGAATGCGC TGACCATGCT GGGGATTGCG
TCCCTTGCTG AATGCGAGTT TAGCGCGTTG TCCGGCGGGC AGCGGCAGCT CGTGCTTATC
GCGCGTGCAT TAGCTTCGGA GTGTCAAATG CTGATTCTGG ACGAACCGAC GGCAGCGCTT
GATGTGCAAA ATCAGGCGCA GGTGCTGCGG TTATTGAAGC ATCTGGCTAA AACGCAGCAC
CTGAGCATCT TGCTGACTAC ACACGATCCC TCGCACGCGC TGGCCATTGC GGAGCAGGCG
CTGCTGCTGA TGGATCATCA GCATTACCTT TATGGTCGCT GTGATGAGGT TGTGACGGAG
GAAACGCTAT CGCGCCTGTA CGGCATTCCG ATGCGGCAGG TCTGCGTGGA GATGTCGCCG
CAGCCTTATC GTGCGCTGAT TCCGATATTG ACGATGACGG AGCCATTATG A
 
Protein sequence
MPTIRLSTES LVYGYRQGQG FFAPLNLCCR EGEITAILGA NGRGKTTLLN TLMGHLSPLS 
GTIQRDGHIG FVPQIFTPPF SYSALDMVLM GRAAHVRLFA MPSAHDITVA RNALTMLGIA
SLAECEFSAL SGGQRQLVLI ARALASECQM LILDEPTAAL DVQNQAQVLR LLKHLAKTQH
LSILLTTHDP SHALAIAEQA LLLMDHQHYL YGRCDEVVTE ETLSRLYGIP MRQVCVEMSP
QPYRALIPIL TMTEPL