| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2843 |
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| Symbol | |
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| ID | 8133797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3216576 |
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| End bp | 3217958 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866131 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_003018408 |
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| Protein GI | 253689218 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTACAA CCTCTTTTTC TTCCCTCTCG CTGCCAGCAG AGCAGTTATC CAATCTTAAT
GAACTGGGTT ATACCGACAT GACGCCCGTT CAGGCGGCGA CGTTGCCAGC CGTTCTGAGT
GGTGCAGATG TGCGTGCCAA GGCGAAAACC GGTAGCGGTA AAACAGCGGC GTTCGGCATT
GGGTTACTGG ATCGTATTGT CGTGAGCGAC TTTACTACGC AGGCGCTGGT GCTGTGCCCG
ACGCGTGAAC TGGCCGATCA GGTCAGCAAA GAGCTGCGTC GTCTGGCCCG TTTTGCGCAA
AACATTAAGA TCCTGACGCT ATGCGGCGGT CAGCCGATGG GGCAGCAGCT CGATTCTCTG
GTTCACGCTC CGCATATTGT TGTCGGGACG CCAGGGCGTA TCCAGGATCA TTTACGTAAG
CAGTCACTGT CTCTGGATAG CCTGAAAGTG CTGGTGCTGG ATGAAGCAGA TCGCATGCTG
GACATGGGTT TCACCGATGC GATTGATGAT GTGATTTCCT ATACGCCGTC CGATCGTCAA
ACCTTGCTAT TTTCTGCCAC GTACCCGGAA GAGATCGAAC AGATCAGTGC GCGCGTTCAG
CGTCAACCGC AGCGTTTCGA GATTGCAGAC GACGTGAAAG AGTCGGCCAT CGAACAACGC
TTCTACGAGA CGACGAAAGA GCAGCGATTG CCACTGTTGA TTTCTATTCT GGGTCATCAT
CAGCCTTCGT CCTGTGTCGT GTTCTGTAAC ACCAAACGCG ACTGCCAAAG CGTGTTTGAC
GCGCTGGATA TGCGTGGGAT TAGCGTATTG GCGCTGCATG GCGATCTGGA ACAGCGCGAT
CGCGATCAGG TTCTGGTGCG TTTTGCTAAC CGCAGTTGCC GCGTGCTGGT AGCAACCGAT
GTGGCGGCTC GTGGGCTTGA TATCAAAGAG CTTGAGCTGG TCGTGAATTT TGAGCTGGCT
TTCGATCCTG AAGTGCACGT TCATCGTATT GGCAGAACGG GCCGTGCGGG TATGCAGGGT
CTGGCTGTCA GCCTGTGTAC GCCACAGGAA ATGAACCGCG CTAATCTGAT TGAAGATTAT
CTCGGTATGC GAATTAAGTG GGCTGCGGCG GATAGCCTTG ACCGTACTGG CGAGGTTACG
CTGGAACCTG AGATGATGAC GCTGTGTATT GATGGGGGCA GAAAAGCGAA AATCCGCCCT
GGCGATATCC TCGGCGCATT AACCGGCGAT GCAGGATTAA CCGCGGCAGA AGTGGGGAAG
ATTGATATGT TTCCGCTGCA TGCTTATGTC GCTATCCGTA AAGCTAGCGC TAAACGCGCA
TTGCAGCAGC TCCAGAAAGG TAAAATCAAA GGAAAAAGCT GTAAGGCCAG ATTGTTAAAG
TAA
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| Protein sequence | MSTTSFSSLS LPAEQLSNLN ELGYTDMTPV QAATLPAVLS GADVRAKAKT GSGKTAAFGI
GLLDRIVVSD FTTQALVLCP TRELADQVSK ELRRLARFAQ NIKILTLCGG QPMGQQLDSL
VHAPHIVVGT PGRIQDHLRK QSLSLDSLKV LVLDEADRML DMGFTDAIDD VISYTPSDRQ
TLLFSATYPE EIEQISARVQ RQPQRFEIAD DVKESAIEQR FYETTKEQRL PLLISILGHH
QPSSCVVFCN TKRDCQSVFD ALDMRGISVL ALHGDLEQRD RDQVLVRFAN RSCRVLVATD
VAARGLDIKE LELVVNFELA FDPEVHVHRI GRTGRAGMQG LAVSLCTPQE MNRANLIEDY
LGMRIKWAAA DSLDRTGEVT LEPEMMTLCI DGGRKAKIRP GDILGALTGD AGLTAAEVGK
IDMFPLHAYV AIRKASAKRA LQQLQKGKIK GKSCKARLLK
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