| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2828 |
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| Symbol | |
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| ID | 8133782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3204199 |
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| End bp | 3205389 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644866117 |
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| Product | integrase family protein |
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| Protein accession | YP_003018394 |
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| Protein GI | 253689204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTAA CCGATCTCAA AATCAAGAAG GCGAAAGCCC AAGACAAACC CTACACACTC
AATGACGGCA ACGGCTTATC TTTGCTGATT GATCCTAAAG GCACAAAGGG CTGGCGCTTC
CGCTATCAGT TTGCCAATAA GCCTAAACTT ATATCGTTTG GCACTTACGA TACTGTATCC
CTTGCCGATG CCCGTAAGAA GCGCGATGAA GCCCGATCCA TGTTGGCTAA TGGCATTAAC
CCCAGCGACG CCCGCAGAGC CGATAAGCTA TCTTTATTGT TCTCTACGGA AAACACCTTT
GAAGCAGTGG CGAGAGAATG GCACACATCA AAACTCACTA CCTGGTCGGA AGGGTACGCC
AAAGAAGTTA TACACTATCT GGAAAAAGAA ATTTTCCCGT TCCTGGGTAA GCGCCCGATA
GACCAGATCA CGCCGCTTGA ACTCTTAGCC GTTCTGCAAA AGATCGAAAA ACGCGGGGCA
TTAGAGCAAG CCAGCAAAAT CCGCCGCCGC TGCGGTGAAG TATTCCGTTA TGCGGTTGTC
ACGGGACGCG CTATGTATAA TCCAGCGCCC GACCTCGACC TAGCCAGCGC CATGAACAAG
CCAAAGAACA ATCACTTTCC GTTCCTCACC GAAAGTGAAC TACCCGATTT TGTTCAGGCG
CTCAATAATT ACAAAGGAAG CCAAATCACC AAATACGCCA CTCAGCTTTT AATGTTGACC
GGTGTTAGAA CCATTGAATT ACGCGCGGCT GAATGGGTTG AATTCGATTT AGATAATGCA
CTGTGGGAAA TACCTAAAGA ACGGATGAAG AAGCGCCGCC CGCATTTGGT GCCACTATCC
ACGCAGGCGG TTACCATTCT GAAAGAACTG AAAGTGCTTA CTGGCTATTA CCAGCTTGTC
TTTCCTGGCC GAAATGACAC AAGAAAGCCG ATGAGCGATG CCGCGATTAA TAAAGTGATC
AAGATGCTGG GTTATCACGG CAGGCTTACC GGTCACGGCT TCAGACACAC CATGAGTACC
ATATTGCATG AGCACGGATT TAACAGCGCA TGGATTGAAA CCCAGCTTGC GCATGTTGAT
AAAAATTCCA TCCGTGGAAC TTATAACCAT GCGCAATACT TAGAAGGACG TAGGGAAATG
TTACAGTGGT ATGGAGAATT CACGAGTGAA GGTAGTAAAA AAAATGCGTA A
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| Protein sequence | MLLTDLKIKK AKAQDKPYTL NDGNGLSLLI DPKGTKGWRF RYQFANKPKL ISFGTYDTVS
LADARKKRDE ARSMLANGIN PSDARRADKL SLLFSTENTF EAVAREWHTS KLTTWSEGYA
KEVIHYLEKE IFPFLGKRPI DQITPLELLA VLQKIEKRGA LEQASKIRRR CGEVFRYAVV
TGRAMYNPAP DLDLASAMNK PKNNHFPFLT ESELPDFVQA LNNYKGSQIT KYATQLLMLT
GVRTIELRAA EWVEFDLDNA LWEIPKERMK KRRPHLVPLS TQAVTILKEL KVLTGYYQLV
FPGRNDTRKP MSDAAINKVI KMLGYHGRLT GHGFRHTMST ILHEHGFNSA WIETQLAHVD
KNSIRGTYNH AQYLEGRREM LQWYGEFTSE GSKKNA
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