| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2824 |
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| Symbol | |
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| ID | 8133777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3198219 |
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| End bp | 3199502 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866112 |
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| Product | long-chain fatty acid outer membrane transporter |
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| Protein accession | YP_003018390 |
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| Protein GI | 253689200 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.489519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCAGA AAAACCTGTT CAAACAATCC ACAATTGCTG TTGCGGTGGC CCTGTTTTCA
GCAAATGTGT CAGCAGCTGG TTTCCAGCTA AATGAATACT CCTCATCGGG TCTGGGACGT
GCATTTTCTG GTGAAGGTGC TGTAGCCGAC AATGCGGCCT CCGGCAGCCG TAACCCGGCG
ACCATGACCA TGTTTGACCG CCCGTCCTTC TCAGGTGGTG TCACCTATAT CAACCCGGAT
ATCGATGTTC AGGGGAAAAA CTCTCTGGCA GGGCAAAATA CCAGCGCCAA GAACATCGCA
CCACACGCCT GGGTGCCAAA CCTGCATTTC ATCATGCCGC TGGATGATCA GTGGGCGATT
GGTGCTTCTG CGACCACCAA CTACGGTTTG GCAACGGAAT TCAATGATAC TTATGCCGCA
GGTTCGATCG GCGGCAAAAC CGATCTATTG ACGTCAAACC TGAACCTGAG CGCCGCTTAT
CGTCTGAACC AACATTTTAG CTTCGGTTTA GGTGTTAACG CCGTCTATGC CGATGCGAAA
ATTGAGCGTC GTGCTGGTGA GCTTGCCGCT GGTGGTTTGC AGCCGTCTTC TGAGTTAGTA
CACATGGAAG GCAAAGAATG GGGCTACGGT TGGAATGCCG GTATCTTGTA TGAAGTCGAC
GAAAATAACC GCTTCGGCTT CACCTACCGT TCAAAAGTTA AGATCGATTT TGATGGCGAT
TACCATAGTG CCAAACCGTC CATCGCCCCA GGTCTGCCTG TAGGGACAAG TGGTGCAACG
ATCCCTGGCA AGCTGACACT GAATCTGCCA GAAATGTGGG AAGCTTCAGC CTATCATCGT
GTAGCACCGA AATGGGCCGT TCACTACAGT CTGGCCTATA CCAGTTGGAG CCAGTTCCAG
GAGTTGAAAG CGACTGGCAA CAACGGTCAG ACGTTGTTCC ATAAAGATGA AAGTTTCCGT
GATGCTTACC GTATCGCACT GGGTACCACC TACTATCATG ATGATAACTG GACATTCCGT
GGCGGTATCG CGTTTGATGA CAGCCCGGTA CCAGCCGACA AACGCTCTAT TTCTATCCCG
GATCAGGACC GTTTCTGGTT GAGCGCTGGT ACCACCTATG CGTTTAATAA AGACGCCTCT
GTTGATGTTG GTGTGTCCTA CATGCACGGC AAACAAGTTG ATATTAGCGA ACCTATCTCT
GATGTGGCCG GTTCGCCACG CTATAACTTT ACCTCTAAAG GTAAAGCTTG GCTGTACGGC
GTAAACTTCA ACTATGCGTT CTAA
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| Protein sequence | MNQKNLFKQS TIAVAVALFS ANVSAAGFQL NEYSSSGLGR AFSGEGAVAD NAASGSRNPA
TMTMFDRPSF SGGVTYINPD IDVQGKNSLA GQNTSAKNIA PHAWVPNLHF IMPLDDQWAI
GASATTNYGL ATEFNDTYAA GSIGGKTDLL TSNLNLSAAY RLNQHFSFGL GVNAVYADAK
IERRAGELAA GGLQPSSELV HMEGKEWGYG WNAGILYEVD ENNRFGFTYR SKVKIDFDGD
YHSAKPSIAP GLPVGTSGAT IPGKLTLNLP EMWEASAYHR VAPKWAVHYS LAYTSWSQFQ
ELKATGNNGQ TLFHKDESFR DAYRIALGTT YYHDDNWTFR GGIAFDDSPV PADKRSISIP
DQDRFWLSAG TTYAFNKDAS VDVGVSYMHG KQVDISEPIS DVAGSPRYNF TSKGKAWLYG
VNFNYAF
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