Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2796 |
Symbol | |
ID | 8133749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3167900 |
End bp | 3168640 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866084 |
Product | hypothetical protein |
Protein accession | YP_003018362 |
Protein GI | 253689172 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGTA AATTTCAGAA CCGCCTGGTG GGTACGGTCA TTCTGGTCGC GCTGGGCGTG ATCATTTTAC CCGGCCTGCT GGATGGTAAG AAAAAGCACT ACGAGGACGA GTTTGCGTCG ATTCCGCTGA TCCCTAAACC GGGTGATAGT AATGAGATGG AATCGCTGCC TGCGTTGAAC CCGTCGCTGC CGAGTCAGCC ACCGGAAGGG GCGGAGGCGG CGATGCAGAA CAGCCCGGAA GCCGAAGCGC CTGATGCGAG ATCATCGGCA GCGACAGCAC CTGAAACCAC GACGCAGACA CCGCCATCAT CCCATTCTGG CGCGAATACG CCAGCGATGA CGGCACCGCC GGTTGTAGTG GAACGTCCGC CGGTTCAGAC GCCGAAGCCT CAGCCAAAAC CTGAGGTGAA ACCGGAAGTA AAACCGAAGC CTGAGCCTAA ACCGGAACCC AAACCGGAAG TGAAGCCTGA AACACAGCCG ACGCAGCAAG CGCCCGTCGG ACAGGCTTAT ATTGTTCAGC TCGGTGCGCT GAAAAACGCG GATAAGGTGA ACGAGATTGT CGCCAAATTG CGTCTCTCTG GCTATCGTGC GTATACCGTA CCGTCAACGC CGGTTTCAGG GCAAATCACC CGTATTTACG TGGGGCCGGA TGCCTCGAAG CAGAAGCTGG AGTCGTCGCT GGGTGAACTG CAACAGCTCA GCGGACTCAG CGGGCAGGTG CGTGCACATT CCGTTCGTTA A
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Protein sequence | MASKFQNRLV GTVILVALGV IILPGLLDGK KKHYEDEFAS IPLIPKPGDS NEMESLPALN PSLPSQPPEG AEAAMQNSPE AEAPDARSSA ATAPETTTQT PPSSHSGANT PAMTAPPVVV ERPPVQTPKP QPKPEVKPEV KPKPEPKPEP KPEVKPETQP TQQAPVGQAY IVQLGALKNA DKVNEIVAKL RLSGYRAYTV PSTPVSGQIT RIYVGPDASK QKLESSLGEL QQLSGLSGQV RAHSVR
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