| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2789 |
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| Symbol | |
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| ID | 8133742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3162744 |
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| End bp | 3163433 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866077 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018355 |
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| Protein GI | 253689165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.113989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTATG GCTATTCCCA GCTAATTCTG GATGGTGCCA TCATGACGCT GGAGCTGGCA
GCGAGTTCGC TGGTGCTGGC GCTGGCTATC GGCCTGATTG GCGCATCGGC GAAGCTGTCT
TCCAACCGGC TGCTGGCAGG GTGTTTTTCC TGCTATACCA CGCTGATTCG TGGCATTCCC
GACCTGGTGC TGATGCTGCT GATTTTCTAT GGCCTGCAAA TCGTCTTAAA CGGCGTGACG
GAGTCGATGG GGGTGGCGCA GATTGACATC GACCCTTTGA CCGCCGGGAT TATCACGCTG
GGCTTTATTT ACGGCGCCTA TTTCACGGAA ACCTTTCGAG GTGCCTATCT TGCTGTACCG
CGTGGGCAAA TCGAAGCGGC TGTGGCATTC GGTTTTTCTC CTATGAAGGT GTTCCGCCGT
ATTCTGTTTC CTTCCATGAT GCGCTTTGCG CTGCCTGGCA TTGGCAATAA CTGGCAGGTG
ATCCTGAAAG CTACGGCGCT GGTGTCACTG CTTGGCCTGA ATGATGTGAT TAAGGCGACG
CAACTGGCGG GAAAGGGCGC ACATGAACCG TTTTATTTTG CGCTGGTCGC TGGGGCGATG
TACCTGATTT TTACCACCAT TTCTAACGGC GTGCTGTGGT GGCTGGAAAG GCACTATTCG
CAGGGAGTCA AGAAAGTAAA CTATGAGTGA
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| Protein sequence | MLYGYSQLIL DGAIMTLELA ASSLVLALAI GLIGASAKLS SNRLLAGCFS CYTTLIRGIP
DLVLMLLIFY GLQIVLNGVT ESMGVAQIDI DPLTAGIITL GFIYGAYFTE TFRGAYLAVP
RGQIEAAVAF GFSPMKVFRR ILFPSMMRFA LPGIGNNWQV ILKATALVSL LGLNDVIKAT
QLAGKGAHEP FYFALVAGAM YLIFTTISNG VLWWLERHYS QGVKKVNYE
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