| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2788 |
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| Symbol | |
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| ID | 8133741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3162035 |
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| End bp | 3162751 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866076 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018354 |
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| Protein GI | 253689164 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.133608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGA TCCTGCAACA ATATTGGCAG CCGCTCCTGT GGAGCGATGG TTACCGACTG
ACCGGGCTGG CGATGACGCT CTGGCTGCTC ATTTCTTCGG TGGTCATCGG TGGGCTGATG
GCGCTGCCGC TGGCGATTGC CCGCGTGTCG CCTCGACGTC GGTTCAGCTT TCCGGTGTGG
TTATTTACTT ACGTGTTCCG CGGTACGCCG CTCTATGTGC AGCTTCTGGT GTTCTATTCC
GGCGTGTATA GCCTGGAGAT TGTGCGCGGC ACCGATCTAC TGAATGCCTT TTTTCGCAGC
GGGCTAAACT GTGCCATCTT GGCGCTGGCG CTCAATACCT GTGCCTATAC GACAGAGATT
TTTGCCGGTG CCATCCGCGC GGTGCCGCAT GGGGAAATTG AAGCGGCCAG AGCATACGGA
TTCTCCCGTT TTAAGCAGTA TCGCTGCATT ATTTTGCCGG GAGCGCTGCG TATTGCGCTG
CCTGCCTACA GCAACGAAGT GATTCTGATG CTGCATTCGA CGGCGCTGGC CTTCACTGTA
ACCGTACCGG ATATTCTGAA GATTGCCCGA GATATCAACG CCGCAACCTA CCAACCGTTT
TATGCATTTG GTATTGCTGC GGTCATCTAT CTGGCGATTT CATTTGTGTT AATCGGGCTG
TTCAGAAGGG CGGAACGGCG CTGGTTACGT CATCTTTATA CCCGTTCATC TCATTAA
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| Protein sequence | MSEILQQYWQ PLLWSDGYRL TGLAMTLWLL ISSVVIGGLM ALPLAIARVS PRRRFSFPVW
LFTYVFRGTP LYVQLLVFYS GVYSLEIVRG TDLLNAFFRS GLNCAILALA LNTCAYTTEI
FAGAIRAVPH GEIEAARAYG FSRFKQYRCI ILPGALRIAL PAYSNEVILM LHSTALAFTV
TVPDILKIAR DINAATYQPF YAFGIAAVIY LAISFVLIGL FRRAERRWLR HLYTRSSH
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