Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2772 |
Symbol | |
ID | 8133725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3145235 |
End bp | 3145675 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644866060 |
Product | NADH dehydrogenase subunit A |
Protein accession | YP_003018338 |
Protein GI | 253689148 |
COG category | [C] Energy production and conversion |
COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0704132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACAA CTACTGAAAT CCTCGCCCAT CATTGGGCAT TTGGGCTATT CCTTATCATT GCCGTAGGCC TTTGCGTCTT CATGCTGACC GGTGGATTCT TGCTGGGGGG GAGAGCCAGA GCCAGAGCTA AAAACGTACC TTATGAATCC GGGATCGACT CAGTGGGTTC AGCGCGGTTA CGCCTGTCTG CTAAATTTTA TCTTGTCGCT ATGTTCTTCG TTATCTTCGA CGTTGAAGCC CTCTATCTCT ACGCTTGGGC TGTGTCTATC AAAGAAAGCG GCTGGATTGG CTTCATTGAA GCAACCATTT TCATTTTGGT GCTGTTGGCT GGTTTGATTT ATCTGGTACG CGTTGGGGCA CTTGACTGGA CCCCGGTACG TTCCAAGAGA CAAGTCGTTA AATCAGACAT CATCAACACT ACCAACACTC ATCCGCAGTA A
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Protein sequence | MSTTTEILAH HWAFGLFLII AVGLCVFMLT GGFLLGGRAR ARAKNVPYES GIDSVGSARL RLSAKFYLVA MFFVIFDVEA LYLYAWAVSI KESGWIGFIE ATIFILVLLA GLIYLVRVGA LDWTPVRSKR QVVKSDIINT TNTHPQ
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