| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2739 |
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| Symbol | |
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| ID | 8133692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3107393 |
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| End bp | 3108532 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866027 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_003018305 |
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| Protein GI | 253689115 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGATT ATGAAACATT ACGCCTGATT TGGTGGGGAT TGATTGGCCT GTTGTTCATC
GGCTTCGCCA TCACCGACGG CTTTGATATG GGCGTAGGCA TTCTGCTGCG CCTGCTGGGC
AAGAACGATA CCGAGCGACG GGTGATGATC AACGTGATCG CTCCACACTG GGACGGCAAT
CAGGTCTGGC TCATCACCGG CGCGGGTGCG CTGTTCGCCG CCTGGCCGAT GGTTTATGCC
GCCGCCTTTT CCGGTTTCTA TTTCGCGATG ATCCTAGTGC TGGCCGCTCT GTTCTTCCGC
CCGGTTGGCT TTGATTATCG CTCCAAGCTG GAAAACCGCC GCTGGCGCAA TATGTGGGAC
TGGGGCATTT TCATCGGCAG CTTCGTCCCT ACGCTGGTGT TCGGCATCGC ACTTGGGAAC
CTGTTGCAGG GCGTGCCGCT GAGCGTCGAT ATGTATTTGC GCCTCACCTA CCACGGCGGA
TTCTTTGGCC TGTTGAACCC GTTTGGGCTG CTGGCGGGCG TGGTAAGCGT CGCCATGATC
GTCGCACACG GCGCGATTTA CCTGCAAATG CGCACCACCG ATGCACTTCA GCGCCGCGCG
CAAAAAACCG TACTGTTTTC CTGTGCACTG ATGAGCCTCA CCTTCTTACT GGCTGGCTTC
TGGGTGCAAA CCGGCATCGA CGGCTACATG ATTACCTCCG TAATGGATAA AGCGGCCCCG
TCTAATCCGC TGCACAAAGA AGTGGCGCAG CAGGCCGGTG CCTGGTTAGC CAACTTTACG
GCACATCCTA CACTGTGGGC GATCCCCGCG TTGGGCGTGA TTCTGCCGTG GCTAACCATG
CTCTTCTCAC GCCTGAACCG CTGCGGTTGG GGTTTTCTGA CCTCGTCATT GACGATTGTC
TGCGTGATTC TGACGGCAGG GATTACGCTG TTCCCATTCA TTATGCCTTC CAGTTTTGAT
CCCAACGTCA GCCTGACCAT CTGGGATGCC ACGTCCAGCC AACTGACGCT TCAGGTGATG
ACCATTCTGG CCTGTATTTT TGTCCCCACC ATCCTGCTTT ATACCAGTTG GTGTTATTAC
AAAATGTTTG GCCGGGTCGA TGCCCGCTAC ATCGAAGAAA ATAAGCATTC CGTTTACTAA
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| Protein sequence | MLDYETLRLI WWGLIGLLFI GFAITDGFDM GVGILLRLLG KNDTERRVMI NVIAPHWDGN
QVWLITGAGA LFAAWPMVYA AAFSGFYFAM ILVLAALFFR PVGFDYRSKL ENRRWRNMWD
WGIFIGSFVP TLVFGIALGN LLQGVPLSVD MYLRLTYHGG FFGLLNPFGL LAGVVSVAMI
VAHGAIYLQM RTTDALQRRA QKTVLFSCAL MSLTFLLAGF WVQTGIDGYM ITSVMDKAAP
SNPLHKEVAQ QAGAWLANFT AHPTLWAIPA LGVILPWLTM LFSRLNRCGW GFLTSSLTIV
CVILTAGITL FPFIMPSSFD PNVSLTIWDA TSSQLTLQVM TILACIFVPT ILLYTSWCYY
KMFGRVDARY IEENKHSVY
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