| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2730 |
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| Symbol | |
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| ID | 8133683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3093120 |
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| End bp | 3097310 |
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| Gene Length | 4191 bp |
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| Protein Length | 1396 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644866018 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_003018296 |
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| Protein GI | 253689106 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit
[TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC CGCATCTGAT TGTGATTGGT AATGGGATGG CAAGCGCACG ATTCGTCGAT
GTGCTGCGTC AACTGGCCGC GACGCGCTAC CGCATCACCG TGATTGGTGA TGAACCGCGC
GTCAGCTATA ACCGCATTCT GCTGTCGCCG GTATTGAGCG GCGAAAAAGC GTTTACGGAT
ACGTTGTTAA CGCCCGCAGC TATCGACGAC GATGCGGCGC TGCCGGTGAA CACTCTGCTG
GGTGAGCGGG TAACCCATAT CGATCGCCAG CAGCGTGAGG TGACAACGAC GCAACGGCAA
CTGCATTACG ACCATTTGGT GCTGGCGACA GGTTCCACGC CTTTTATGCC GCCGATGCCC
GGTATCGATC TGGCGGGGGT GTGTGGCTTC CGTACGCTGG ATGATGTCGA GCTGATGTTG
ACGATGATCC GCCGGTCCGT TCCTGCGGTG GTGATTGGCG GGGGCTTGCT CGGGATTGAA
GCGGCAGCGG CGCTGAAACT GCGCGGCGCT GACGTCACGC TGCTGCATCG CGTTCCGGTT
TTGATGGAGC GGCAGTTGGA CGCTATGGCA AGCGACCTGC TGTGCGACAG CCTGCGCGCA
CGCGGTATTG CCTGTGAGAC GGATGTGCAG GTTGTGGCGC TACACGGTGA TGAACACGGC
GTCACGGCTG TTGCACTGGC GGATGGCCGC ACGATCCCCG CCGGTCTGGT GGTGGTGACC
GCTGGCGTGA TCCCCGCCAG CCAGCTTGCA CGCGAGTGCG GATTACCCTG CAACCGCGGC
ATCCTGGTGG ACGGTCAACT GCAAACTGCT GACCCCTATA TCAGCGCGAT CGGCGAATGC
TGCGAGCTCA ACGGTGAAGT CGTCGGGCTG GTTGCCCCGT GTTTTGCCCA TGCCACGCTG
GTGGCGCAGC GTCTGGCCGG ACATGCACCG CAAGATTATC AGCGTGAACA GGCGGCGACG
CGGCTGAAAG TTACGGGCAT TGGCGTGGTC AGCGGCGGCG ATATTAACGT GGCGCCGGAT
GATGAGGTGT ACACCCTTTT TGATCCGCAG ACGCAGCACT ATCGTCGTCT GCTCCTGCGC
GACGGGCGGC TAAGCGGTGT TCTGCTGTAT GGCGACACCG ACGACAGCCA GCGTCTGCTG
GCCGCAATGG ATCGCGCAAC CGCAGGCGAG ACGATTCCGC CTGCCTCGCT GCTTTTTGGC
TTTTCTTCCC CCGATTCTGA CTCACAGCCT GAAGCTGTAA GGATTCCTGT CATGAGCAAA
CCTATTTTAG TGGTCGTTGG CCACGGTATG GTCGGCCACT ATTTTCTTGA ACAACTGGTC
GAGCGCGACT TGCATCAGCA CTACCACATC GTCGTCTTTG GCGAAGAACG CCATGAAGCC
TATGACCGCG TGCATCTCTC CGAGTATTTC TCAGGGCGCA GCGCCGCCTC GCTGTCGCTG
GTAAAAGAGG GCTTTTTTGC CGAGAGCGGT ATTGAGCTGC GCAGCGCCAG TGAGATCGTG
GCTATCGATC GGGAACGTCA ATGCGTGTCT GACGCGCAGG GCAGAGAAAT CGCCTACGAC
AAACTGGTGC TGGCGACGGG CTCTTATGCG TTTGTTCCGC CGATTCCCGG CAATACGCGC
CCCGGCTGTC TGGTGTATCG CACGCTGGAC GATCTGGACG CGATTGCGGC ACAGGCGAAA
AAGGCTAAAT CCGGCGTGGT AATCGGTGGC GGCTTGCTGG GGCTGGAAGC CGCCAATGCC
CTGCGTCAAT TGGGGCTGGA CACTCATGTG GTGGAATTTG CGCCGCGCCT GATGGCGGTA
CAGTTGGATG ACGGCGGTGC CACCATGCTG CGGCGCAAGA TTGAAGCGCT GGGCGTACAG
ATTCATGTCA GCAAAGAAAC GCGAGAAATT ACCGACGGCG AGCAGGCGTT GCATCGTCTC
TGCTTTGCTG ACGGCAGCGT ACTGGAAACC GATTTAGTGC TGTTTTCCGC CGGAATTCGT
CCGCGTGACA AACTGGCGGA TAGCTGTGAT TTAGAGAAAG GACCACGCGG TGGCATTGTG
ATTGATGACC ATTGCCAAAC CTCCGATGAC GCAATTTTTG CCATCGGCGA ATGTGCGCTA
TGGAAAGGCC AGATTTTCGG ACTGGTGGCA CCGGGTTACC AGATGGCACG TAGCGTAGCC
GATACCCTGG CGCAGCGGGA TACGCCATTT ACCGGCGCGG ATATGAGCAC CAAGCTGAAA
CTGCTGGGCG TTGATGTGGC CTCAATTGGC GATGCGCACG GACGCACGGC GGGAAGCCAA
AGTTATCAGT GGACGGACGG TCCGAACGAG ATCTACAAAA AAATCGTCGT GTCTGCCGAC
GGCAAGCATT TACTGGGGGC GGTATTGATT GGCGATAGCA GCGATTACAG CACGTTGCTG
CAAATGATGC TCAACGATAT GCCTTTGCCT GCACAGCCGG AAAGCCTGAT TTTACCTGCA
CGTTCTGGCG ATGCGCCGAA AGGGCTGGGC GTGGCGGCGT TACCGGCCAG CGCACAGATC
TGTTCTTGCC ATAATGTCAG CAAAGGCGAT ATCTCAGCGG CGGTAGCGGG TGGCTGCGGC
GAGCTGGGCG CGCTAAAAAC CTGCACCAAA GCGGGAACGG GCTGCGGCGG CTGTGTGCCG
CTGCTTAAAC AGGTGATGGA ATATGAACTG ACGCAGTTAG GCGTCGAAGT GAAAAAGGAC
ATTTGCGAGC ACTTCGCCTA CTCACGTCAG GAGCTGTATC ACCTGATCCG CGTGCATGAA
ATCCGTTCAT TCGACAGCCT TCTTGAGCGT TATGGCCACG GCTTGGGCTG TGAAGTGTGT
AAGCCGCTGG TGGGGTCGAT GCTGGCGTCT TGCTGGAATG ATTATCTGCT GCAACCGCAG
CACCTGCCGT TGCAGGATAC CAACGATCGT TTCTTCGCCA ACATCCAAAA AGACGGAACG
TATTCCGTGG TGCCACGCGT TCCGGCAGGG GAAATTACGC CAGAAGGGTT AATCGCCATC
GGTCAGGTGG CGCAGCGCTA CAACCTGTAT ACCAAGATCA CCGGCGGCCA GCGAGTGGAC
TTATTCGGTG CACGATTGGA ACAACTACCG GCGATCTGGC GTGAGCTGAT CGACGCTGGA
TTTGAAACCG GCCATGCCTA CGGTAAATCG CTGCGTACCG TGAAATCCTG CGTGGGTTCG
ACCTGGTGCC GCTACGGCGT GCAGGATTCC ACCGGGCTGG CGATTCAACT GGAGCACCGT
TACAAGGGGC TGCGTTCACC GCATAAGATC AAAATGGCGG TGTCTGGCTG TACCCGCGAA
TGTGCAGAAG CGCAGAGCAA AGATATCGGC GTAATTGCCA CTGATAAAGG CTGGAACCTT
TACGTGTGCG GCAACGGCGG TATGAAACCG CGCCATGCGG ATCTCTTCGC CAGCGATCTG
GATACGGAAA CCCTGCTGCG CACCATCGAT CGGGTCTTGA TGTTTTATAT CCGCACCGGC
GATCGCCTCC AGCGAACCAG CACCTGGATG GATAATCTGG AGGGCGGTAT CGACTATTTA
CGTCAGGTGA TTCTGGAAGA CAGCCTGAAT ATCGGCGAAG AGCTGGATAA AGAGATGCAG
CGTGTGGTGG AGGCCTACCA GTGCGAATGG CAAACCACGT TGGAAAGCCC GGAACGTCTG
GCGCTGTTCC GCGGCTTCCT GAACAGCGAT AGCCCGGATG AAGCGGTGGT GATGGTGCCG
GAGCGTGGAC AGATTCGTCC GGCACAGGAA CATGAGAAAG CGGTATCGCC AGAACCGGTT
GCGCTGAAGC CCACGGCACA TGAAGCGGAA TGGGTGCAGG TGGCGACGCT GGGGGATATT
CCGCGTCATG CGGGTATGGC GGCACGCCTC GGACAGCAGC AAATCGCGCT GTTCCATCTG
CCGGGGAGCG AGCAGCAGGT GTACGCGCTG GAAAACCATG AACCGGGTAG CGGGGCGAAT
GTGTTGTCCC GTGGGCTGAT CGGTGACGTG GCGGGTGAAC CCGTCGTGAT TTCTCCGCTG
TACAAGAAAC GCTTCAAGCT GCGTGATGGC GTGAGCCCGG ATGACAGCGC GCTGTACGTA
CGCGCCTGGC CAGTGCGCGT GAAAGATGAC GAGATTTGGG TATGCCGTCA GCCGCTGGCC
GTACCGGAAA GCGTCGGTCT GGCAGATGCT GCTATGGCGA AAGCATCATG A
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| Protein sequence | MMKPHLIVIG NGMASARFVD VLRQLAATRY RITVIGDEPR VSYNRILLSP VLSGEKAFTD
TLLTPAAIDD DAALPVNTLL GERVTHIDRQ QREVTTTQRQ LHYDHLVLAT GSTPFMPPMP
GIDLAGVCGF RTLDDVELML TMIRRSVPAV VIGGGLLGIE AAAALKLRGA DVTLLHRVPV
LMERQLDAMA SDLLCDSLRA RGIACETDVQ VVALHGDEHG VTAVALADGR TIPAGLVVVT
AGVIPASQLA RECGLPCNRG ILVDGQLQTA DPYISAIGEC CELNGEVVGL VAPCFAHATL
VAQRLAGHAP QDYQREQAAT RLKVTGIGVV SGGDINVAPD DEVYTLFDPQ TQHYRRLLLR
DGRLSGVLLY GDTDDSQRLL AAMDRATAGE TIPPASLLFG FSSPDSDSQP EAVRIPVMSK
PILVVVGHGM VGHYFLEQLV ERDLHQHYHI VVFGEERHEA YDRVHLSEYF SGRSAASLSL
VKEGFFAESG IELRSASEIV AIDRERQCVS DAQGREIAYD KLVLATGSYA FVPPIPGNTR
PGCLVYRTLD DLDAIAAQAK KAKSGVVIGG GLLGLEAANA LRQLGLDTHV VEFAPRLMAV
QLDDGGATML RRKIEALGVQ IHVSKETREI TDGEQALHRL CFADGSVLET DLVLFSAGIR
PRDKLADSCD LEKGPRGGIV IDDHCQTSDD AIFAIGECAL WKGQIFGLVA PGYQMARSVA
DTLAQRDTPF TGADMSTKLK LLGVDVASIG DAHGRTAGSQ SYQWTDGPNE IYKKIVVSAD
GKHLLGAVLI GDSSDYSTLL QMMLNDMPLP AQPESLILPA RSGDAPKGLG VAALPASAQI
CSCHNVSKGD ISAAVAGGCG ELGALKTCTK AGTGCGGCVP LLKQVMEYEL TQLGVEVKKD
ICEHFAYSRQ ELYHLIRVHE IRSFDSLLER YGHGLGCEVC KPLVGSMLAS CWNDYLLQPQ
HLPLQDTNDR FFANIQKDGT YSVVPRVPAG EITPEGLIAI GQVAQRYNLY TKITGGQRVD
LFGARLEQLP AIWRELIDAG FETGHAYGKS LRTVKSCVGS TWCRYGVQDS TGLAIQLEHR
YKGLRSPHKI KMAVSGCTRE CAEAQSKDIG VIATDKGWNL YVCGNGGMKP RHADLFASDL
DTETLLRTID RVLMFYIRTG DRLQRTSTWM DNLEGGIDYL RQVILEDSLN IGEELDKEMQ
RVVEAYQCEW QTTLESPERL ALFRGFLNSD SPDEAVVMVP ERGQIRPAQE HEKAVSPEPV
ALKPTAHEAE WVQVATLGDI PRHAGMAARL GQQQIALFHL PGSEQQVYAL ENHEPGSGAN
VLSRGLIGDV AGEPVVISPL YKKRFKLRDG VSPDDSALYV RAWPVRVKDD EIWVCRQPLA
VPESVGLADA AMAKAS
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