| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2721 |
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| Symbol | |
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| ID | 8133674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3082537 |
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| End bp | 3083535 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866009 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003018287 |
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| Protein GI | 253689097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCTT CTTCTTTGGT GGCGCAGCCT GTGCTGCCGG GTAACAAGGC AGGGCTGTCG
TTTTTTATCC GCTATGGCTT TCTGGTCATC CTGCTGGCCT TTCTGGTGTT TTTCTCACTG
CAAAACCCGA TATTTTTGAC GTTAGGCAAC TGGGGGAACC TGCTGCAAGG CAGCGCGGTA
CTGCTGATTG TGGCGCTGGC CATGACGCTG GTGGTGACAG CGGGTGGGAT CGACCTGTCC
GTGGGCGTTG CGCTGGATTT TGGCGCTGCC TTCGCGCTGG TGGCGCTCAA AGTCTATGGT
CTGCCGTGGC AGGCTGCAGT ATTGGCCGCG TTGGCGGGGG GCGCGCTGGT AGGGCTGGTT
AATGCGGTGC TGATTATTCA TTGTCGAATT AAGCCGTTTT TGGCGACGCT AGGGACATGG
TTTATCGGTA GCAGCATCGA ACGTATCTAC ACCGAAGGCG GTGGACCGAT CGCTTACCGC
CGGATGGCGC CGCAGTACCA CGAACTGGCC GTGGGTGACC TGTGGGGCAT TCCGGTGCCG
ATCGTGATTG TGGCGGTGCT GTGGCTTGCC TATTACCTGT TTTTTGAACG GACGATTGCT
GGTAAACGTA TTCATGCGAT GGGCTTGAAT GCGCCAGCGG CGCTGATTGC CGGAGTTAAC
GTGCGGCGCA CGATGTTCTG GTTGCTGATT GTCACGTCGG TGACGTGCGC TATCGGCGGC
GTGGTGTTAT CCGCCAATCT GCGGCAGTTT ACGCCGCTGG CCGGACAGGC TTACCTGATG
GACGCGATTG CCGCGGTGTT CATCGGCACC GCGTTCCACG CGCAGGGGCG ACCCAACGTG
GCGGGGACGC TAATTGGCGT GCTGTTTCTC GGTATGATCG CCAATGGTTT GAACCTGATG
GGGCTGAATT TCATCGTAAA AGATGCGCTG AGCGGCGTGA TTTTAGTACT GGCGTTGGCG
CTCTCTTTCC TGCAAGGGCG GCTGCGTCAA CGGCAATAA
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| Protein sequence | MKPSSLVAQP VLPGNKAGLS FFIRYGFLVI LLAFLVFFSL QNPIFLTLGN WGNLLQGSAV
LLIVALAMTL VVTAGGIDLS VGVALDFGAA FALVALKVYG LPWQAAVLAA LAGGALVGLV
NAVLIIHCRI KPFLATLGTW FIGSSIERIY TEGGGPIAYR RMAPQYHELA VGDLWGIPVP
IVIVAVLWLA YYLFFERTIA GKRIHAMGLN APAALIAGVN VRRTMFWLLI VTSVTCAIGG
VVLSANLRQF TPLAGQAYLM DAIAAVFIGT AFHAQGRPNV AGTLIGVLFL GMIANGLNLM
GLNFIVKDAL SGVILVLALA LSFLQGRLRQ RQ
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