| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2720 |
|---|
| Symbol | |
|---|
| ID | 8133673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3081550 |
|---|
| End bp | 3082491 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644866008 |
|---|
| Product | PfkB domain protein |
|---|
| Protein accession | YP_003018286 |
|---|
| Protein GI | 253689096 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAAT TTGATGCGGT TTTTGTCGGA TTAACCATTC TGGATGTCGC TGGTCGACCC
GTAACCGGTT TGCCCGAAGG CGGTGGTGTC CACTTTATCG ATGAAATTCG CCTTAATCCC
GCGGGTACGG CCAGCGGTGC GGCGATGAAT GCAGCCAAAC TCGGTATTCG TACGGCGACG
GCTGCCTGTC TCGGTGAAGA TGAAAAAGCC GATTTTATTC TGGCGACCTA TCGCAAGCTG
GGCATCGACT GTTCGCTAAT ACAGCGAACG ACAGCGGCAT CGACCTCTGC GACTATTCTG
ACCATTCGGC CGGACGGCGA GCGTCCGGCG CTGCACTATC GCGGTGCGTC AGATCACCTG
TTCATCGATG AGCAGGACTT TGACGCCGTG TGCAATGCGC GTTTCTTACA CCACGGTGGC
ACGGGGCTGC TGGCGAAAAT GGATCAGGGG CAGAGTGCGC GTCTGCTTCG ACACGCCAAA
GCGAAGGGGT TGACGACCAG TTTCGATCTT ATCGCGCCAA ATGCGGAGAC ACTGGCGCTG
CTGACACCGT TGCTGCCAGA TGTAGACTAC TTTATGCCGT CGCTGGACGA GGCCGCGTTT
ATCTCCGGCC TGACTACACC GGCGGAGATT GCGGCTTTCT TTCTCGATCG CGGCGTCGGC
ACCTGCATTT TCAAAGCGGG TGCCGCCGGA TCTTACGTGT TCGGCCAGGA TGTCACGCTG
CACATTCCCG CCTACCGCGT GGCGGTATCG GATACCACGG GCTGCGGCGA CAGCTACTGC
GGCGGCTTTA TTGCTGGTCT GGCGAAAGGC TGGGCGCTGG AACAAGCCTG CCGGCTTGGC
TCGGCCGTTT CAGGGCTGGT TGCCACCGGA TTGGGTTCTG ATGCGGGTGT GATTGACTGG
GAGCATACGC TGCGGTTTAT GGCAGAAACG CCTACCTATT AA
|
|---|
| Protein sequence | MSQFDAVFVG LTILDVAGRP VTGLPEGGGV HFIDEIRLNP AGTASGAAMN AAKLGIRTAT
AACLGEDEKA DFILATYRKL GIDCSLIQRT TAASTSATIL TIRPDGERPA LHYRGASDHL
FIDEQDFDAV CNARFLHHGG TGLLAKMDQG QSARLLRHAK AKGLTTSFDL IAPNAETLAL
LTPLLPDVDY FMPSLDEAAF ISGLTTPAEI AAFFLDRGVG TCIFKAGAAG SYVFGQDVTL
HIPAYRVAVS DTTGCGDSYC GGFIAGLAKG WALEQACRLG SAVSGLVATG LGSDAGVIDW
EHTLRFMAET PTY
|
|---|
| |