Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2716 |
Symbol | |
ID | 8133669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3077302 |
End bp | 3078390 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866004 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_003018282 |
Protein GI | 253689092 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCAC TGTTTCAACC CTTCAAATTG AAAGACATCA CGTTACGCAA CCGTATTGCC GTTCCACCGA TGTGTACGTA TTCCGCGAAT GACGGCCTGA TTAACGAGTG GCATCAGGTG CATTATGCTT CACTGGCGCG TGGTGGTGCC GGGTTGGTTA TCGTAGAAGC GACGGCGGTT GCCCCCGAGG GCCGCATTTC TCCGCATTGT ACTGGAATTT GGAACGATGA GCAGGCGCAG GCGTTTGCCA AGGTCGCCAA ATCCATTAAG GACGCAGGGT CCGTACCGGG CATTCAGATT GCACACGCCG GACGCAAAGC CAGCGCCAAT GTTCCCTGGG AAGGCGACGA CCATATCCCT GCTGGCGATC CACGCGGCTG GCAGACTATT GCCCCTTCCG CGGTGCCTTT CGGTGCGAAT TTGCCCAAGC AGCCGCAGGA AATGACGCTG GAAGATATTG CCCGCGTGCG TGATGACTTT GTCGCTGCCG CTCGTCGTGC TTTGGACGCT GGGTTTGAAT GGCTGGAACT GCACTTTGCT CACGGCTATC TGGCACAGAG TTTCTTCTCC GTACACTCGA ACAAACGCAA CGATCAGTAC GGCGGCAGTT TTGACAACCG CAGCCGTTTT CTGCTGGAAA CGCTGGCTGC CGTTCGCGAT GTATGGCCGC AGCACCTGCC GCTGACCGCC CGTTTCGGCG TGATTGAATT TGACGGTTGC GATGAGGAAA CCTTGCAGGA ATCCATCGAA CTGACGCGCC GCTTCAAAGC TGCTGGGTTG GATATGTTGA GCGTCAGCAT TGGTTTCTCT ACACCGGAAG CGAATATTCC GTGGGCGCCT GCCTTTATGG GACCGATTGC TAAACAGGTA CGCGAGCAAG CTGATCTTCC TGTCTCTTCG GCCTGGGGCT TCGGTACGCC GGAACTGGCC GAGCAGGCCG TCGCATCGGG CCAGTTGGAT CTGGTGATGG TGGGTAAAGC GCATCTGGCG AACCCGCACT GGAGCTATCA GGCCGCCCGC GAACTGGGTA TCGATCGCGC CTCATGGACG CTGCCAACGC CTTACGCCCA CTGGCTGGAG CGCTATTAA
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Protein sequence | MSALFQPFKL KDITLRNRIA VPPMCTYSAN DGLINEWHQV HYASLARGGA GLVIVEATAV APEGRISPHC TGIWNDEQAQ AFAKVAKSIK DAGSVPGIQI AHAGRKASAN VPWEGDDHIP AGDPRGWQTI APSAVPFGAN LPKQPQEMTL EDIARVRDDF VAAARRALDA GFEWLELHFA HGYLAQSFFS VHSNKRNDQY GGSFDNRSRF LLETLAAVRD VWPQHLPLTA RFGVIEFDGC DEETLQESIE LTRRFKAAGL DMLSVSIGFS TPEANIPWAP AFMGPIAKQV REQADLPVSS AWGFGTPELA EQAVASGQLD LVMVGKAHLA NPHWSYQAAR ELGIDRASWT LPTPYAHWLE RY
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