Gene PC1_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2716 
Symbol 
ID8133669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3077302 
End bp3078390 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content58% 
IMG OID644866004 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003018282 
Protein GI253689092 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAC TGTTTCAACC CTTCAAATTG AAAGACATCA CGTTACGCAA CCGTATTGCC 
GTTCCACCGA TGTGTACGTA TTCCGCGAAT GACGGCCTGA TTAACGAGTG GCATCAGGTG
CATTATGCTT CACTGGCGCG TGGTGGTGCC GGGTTGGTTA TCGTAGAAGC GACGGCGGTT
GCCCCCGAGG GCCGCATTTC TCCGCATTGT ACTGGAATTT GGAACGATGA GCAGGCGCAG
GCGTTTGCCA AGGTCGCCAA ATCCATTAAG GACGCAGGGT CCGTACCGGG CATTCAGATT
GCACACGCCG GACGCAAAGC CAGCGCCAAT GTTCCCTGGG AAGGCGACGA CCATATCCCT
GCTGGCGATC CACGCGGCTG GCAGACTATT GCCCCTTCCG CGGTGCCTTT CGGTGCGAAT
TTGCCCAAGC AGCCGCAGGA AATGACGCTG GAAGATATTG CCCGCGTGCG TGATGACTTT
GTCGCTGCCG CTCGTCGTGC TTTGGACGCT GGGTTTGAAT GGCTGGAACT GCACTTTGCT
CACGGCTATC TGGCACAGAG TTTCTTCTCC GTACACTCGA ACAAACGCAA CGATCAGTAC
GGCGGCAGTT TTGACAACCG CAGCCGTTTT CTGCTGGAAA CGCTGGCTGC CGTTCGCGAT
GTATGGCCGC AGCACCTGCC GCTGACCGCC CGTTTCGGCG TGATTGAATT TGACGGTTGC
GATGAGGAAA CCTTGCAGGA ATCCATCGAA CTGACGCGCC GCTTCAAAGC TGCTGGGTTG
GATATGTTGA GCGTCAGCAT TGGTTTCTCT ACACCGGAAG CGAATATTCC GTGGGCGCCT
GCCTTTATGG GACCGATTGC TAAACAGGTA CGCGAGCAAG CTGATCTTCC TGTCTCTTCG
GCCTGGGGCT TCGGTACGCC GGAACTGGCC GAGCAGGCCG TCGCATCGGG CCAGTTGGAT
CTGGTGATGG TGGGTAAAGC GCATCTGGCG AACCCGCACT GGAGCTATCA GGCCGCCCGC
GAACTGGGTA TCGATCGCGC CTCATGGACG CTGCCAACGC CTTACGCCCA CTGGCTGGAG
CGCTATTAA
 
Protein sequence
MSALFQPFKL KDITLRNRIA VPPMCTYSAN DGLINEWHQV HYASLARGGA GLVIVEATAV 
APEGRISPHC TGIWNDEQAQ AFAKVAKSIK DAGSVPGIQI AHAGRKASAN VPWEGDDHIP
AGDPRGWQTI APSAVPFGAN LPKQPQEMTL EDIARVRDDF VAAARRALDA GFEWLELHFA
HGYLAQSFFS VHSNKRNDQY GGSFDNRSRF LLETLAAVRD VWPQHLPLTA RFGVIEFDGC
DEETLQESIE LTRRFKAAGL DMLSVSIGFS TPEANIPWAP AFMGPIAKQV REQADLPVSS
AWGFGTPELA EQAVASGQLD LVMVGKAHLA NPHWSYQAAR ELGIDRASWT LPTPYAHWLE
RY