Gene PC1_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2715 
Symbol 
ID8133668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3076490 
End bp3077059 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content49% 
IMG OID644866003 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003018281 
Protein GI253689091 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AACTAAACGA CACCCGAGAA AAAATCCTGG CGACCGCTGA GCAACTTATC 
TATCAGAACG GCATTCATGC GACTGGCATG GACCTTCTGG TCAAGACCTC TGGCGTAGCA 
AGGAAAAGTA TTTATCGCTA TTTCGCGACC AAGGATGACG TGGCAGCTGC CGCGTTGAAT 
GCACGTGATG AACGCTGGAT GCACTGGTTC AGAACGGAAT GTGATAAAGG CAATACCCCT 
CAGGAGCGAA TCCTGAATAT GTTCACTGTA CTCAAAAGCT GGTTTGAGTC AGAGGGCTTT 
CGTGGTTGTG CCTTTATTAA CACGGCTGGA GAAGTCGGTG ACCCTGCCGA TCCCGTTCGT 
CAGATCGCGA AGCTTCATAA ACAAAAATTG CTGGATTACA CGCTTGAACT CACCAGTCAA 
TTAAACATTG AGCAGCCGTC AGCCTTAGCC AGACAGTTGC TGATTCTGAT AGAGGGCGCC 
ATCACCACAT CACACGTGAT GGATGATTAC AGCGCAGCCG ATAGCGCAAA AGAAGTGGCG 
CAACTGTTGT TGAAGCAGGC CTCTCACTAG
 
Protein sequence
MNKKLNDTRE KILATAEQLI YQNGIHATGM DLLVKTSGVA RKSIYRYFAT KDDVAAAALN 
ARDERWMHWF RTECDKGNTP QERILNMFTV LKSWFESEGF RGCAFINTAG EVGDPADPVR 
QIAKLHKQKL LDYTLELTSQ LNIEQPSALA RQLLILIEGA ITTSHVMDDY SAADSAKEVA 
QLLLKQASH