Gene PC1_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2711 
Symbol 
ID8133664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3073222 
End bp3073854 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content46% 
IMG OID644865999 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003018277 
Protein GI253689087 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.223328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATC ACGTACATTT CCTTATGTTT GGCCTGGTTG CGTTAGGAAT GGTATTAACT 
CCTGGCCCAA ACATGATCTA TCTAATCTCT CGCTCCATTT GCCAGGGAAA GCGCGCTGGA 
TTTATTTCCC TGGGCGGCGT TGCGCTTGGA TTTGTATTTT ACATGCTTTG TGCCGCATTC 
GGCATAACGG CATTTGTGTT TGCCATTCCT TATGCCTACG ATTTACTTCG TTTTGGCGGA 
GCCGCTTACC TTCTTTATCT CGCCTGGCAA ACTATAAGAC CCGGTGGAAG CTCCCCTTTC 
TCCGTTAAAG ATTTGCCGAT TGATGCCCCT AATAAACTGT TTATGATGGG CTTCATTACT 
AATCTCGCTA ACCCTAAAAT TGCCATCATG TATTTGTCTT TGCTTCCGCA ATTTATTCAA 
CCAGGTCATG GCAGCGTTCT TGGTCAATCA CTGGCGCTTG GATGTGTTCA AATCTTTATA 
AGCCTGATGG TAAATGCCGT GATTGTCATT GTGGCAGGCT CAATCGCAGG GTTTCTTTCG 
GGCCGTCCTT CATGGATAAA AGTGCAACGT TGGTTAATGG GTACTGTACT GGCAGGGTTA 
GCCTTCAAGA TTGCTTTCGA GGCAAAGAGA TAG
 
Protein sequence
MPDHVHFLMF GLVALGMVLT PGPNMIYLIS RSICQGKRAG FISLGGVALG FVFYMLCAAF 
GITAFVFAIP YAYDLLRFGG AAYLLYLAWQ TIRPGGSSPF SVKDLPIDAP NKLFMMGFIT 
NLANPKIAIM YLSLLPQFIQ PGHGSVLGQS LALGCVQIFI SLMVNAVIVI VAGSIAGFLS 
GRPSWIKVQR WLMGTVLAGL AFKIAFEAKR