Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2703 |
Symbol | |
ID | 8133656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3067021 |
End bp | 3067827 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644865991 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_003018269 |
Protein GI | 253689079 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA GTCTGCAATA TGGCGTTTTG CTTGCGGGAA TAGTGTATTG CGCTCCCTTA CAGAGTGCAG AGCTGTCCGG GTACGCGGGT CTGGGCGTTG CCGTCAGCCC TGTTTACTCA GGATCACAGC ATTCTGCGCC CGGTCCGTTG CTCAACGCTG GCGTAAGCCT AAGGAGTGAA AGCTGGGGGC TTTGGGGCCT GTCAACGGAG GGACTAGCGT GGACTCTGCC ATCCGATTCC CCGTTTACCG TGAGCCTGCT GTTAACACCG GATAAGGGGC GAAAAGAGGT GTTCAGCTAT CCATTTTCCA CCCGAAAAAA CCGAGATCTG CAAGGAATGG GCGATCTTCC CGACATGCTC ATGGCGGGTG CGGAACTGCG CTATCAACAT GAGGACTGGG CGTTATGGCT GCGCGCATTA AGCGCAACGC AAAAGCACCC GTACGGTGGC GAAACGCAGG CTCTGGCTAT GACCCTGAAC AGCGGCGTAA AGACAACCCT GTGGCGCTGG CGGGACGCCG ATTTGTCGGT CGCTGGCGAT ATCAGTTGGG CAAACAGCAG TTATCAGCAA CGCCATTACG GGGTAACGAC AAGCCAGGCA CAACGCACTG ATTTTGCCTC TTATTATCCC TCTTCGGGTT TTCAGCAAGG TGGGGTTTAT ACCGAACTAG TCTGGCACAT TAGCGAAAAT CTGGCGGCAG GGGTTACCGG TCGCGCGGCA TACCTGCTTG ATGAGGCGGG CAAGAGTCCG CTGGTAAAAA GCAGAATGCA GTACAGCCTG TCATCACTGA TCCAGTATAC ATTCTGA
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Protein sequence | MKISLQYGVL LAGIVYCAPL QSAELSGYAG LGVAVSPVYS GSQHSAPGPL LNAGVSLRSE SWGLWGLSTE GLAWTLPSDS PFTVSLLLTP DKGRKEVFSY PFSTRKNRDL QGMGDLPDML MAGAELRYQH EDWALWLRAL SATQKHPYGG ETQALAMTLN SGVKTTLWRW RDADLSVAGD ISWANSSYQQ RHYGVTTSQA QRTDFASYYP SSGFQQGGVY TELVWHISEN LAAGVTGRAA YLLDEAGKSP LVKSRMQYSL SSLIQYTF
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