| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2701 |
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| Symbol | |
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| ID | 8133654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3064717 |
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| End bp | 3065394 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865989 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003018267 |
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| Protein GI | 253689077 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAACATTC TCCTAATTGA AGACGACCTC GATCTCGGCA ATGGCGTACG TATTGCCCTT
GAAGATCAAG GATTAGATGT TATATGGGTG CGCCGTAAAG TGGATGCGCT GCATCAACTC
GATCTCTGCG TGCCAGAACT TGTATTGCTC GACCTCGGCC TGCCCGACGG TGATGGTATG
AGCCTGATGG CGAGTCTGCG TCAGCAGCTC AAGGGAATCC CCGTTATCAT CCTGACTGCC
CGAGGTACCC TGCAAGATCG CCTGACTGGG CTGGATGCTG GTGCGGACGA CTATCTCGTC
AAACCTTTCG TTCTCGCCGA GTTGTTGGCC AGAGTGAGAG CACTTGCGCG GCGCAGTTAC
GGTTTTCAGG ATGAGGTGAT AGAAATTCGA GGATTATCTC TCCATGTGCC GACTCGACGC
GTGGCCGTGG GTACACGTAA TGTTGATTTG ACGGCAAGTG AATACGCGCT GCTTGAAACG
TTAATGCTGC GCACTGACCG CGTGCTTACA CGACGGTTTC TGGAAGAAAA GATATTCGGT
GCAAAAGAAA ACATGAGCAA TCCTCTCGAT GTGCACATGG GCAATTTGCG TCGCAAAATC
GGCGAGGGCT ATGTGCGAAC GGTGAGGGGC GTAGGGTATG TCATTGATAC CGTACCGATT
CAGAAGGGTG CAGGTTGA
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| Protein sequence | MNILLIEDDL DLGNGVRIAL EDQGLDVIWV RRKVDALHQL DLCVPELVLL DLGLPDGDGM
SLMASLRQQL KGIPVIILTA RGTLQDRLTG LDAGADDYLV KPFVLAELLA RVRALARRSY
GFQDEVIEIR GLSLHVPTRR VAVGTRNVDL TASEYALLET LMLRTDRVLT RRFLEEKIFG
AKENMSNPLD VHMGNLRRKI GEGYVRTVRG VGYVIDTVPI QKGAG
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