| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2697 |
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| Symbol | |
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| ID | 8133650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3060779 |
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| End bp | 3061444 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865985 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018263 |
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| Protein GI | 253689073 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.817852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACTATC AATGGGATTT CTCGCTGGTC TGGGACAACC TTCCCGTGCT GCTGAAAGGC
CTCGGCGTCA CACTCGAACT CTGGCTGCTG GCCGGTGTGT TGGGAACCGT GCTAGGGCTG
GTTTTCGGTC TTTTTCGCGT ATTTGGCAAA CGCTGGCTGT CGCTGCCCGC CAGAGTCTTT
GTCGAAATCT TCCGTAATAC CCCGGTCCTG ATTCAACTGA TCTGGTTTTA TTACGCTTTT
CCGGTTCTGG TCGGCATACA GTTCAGCACC TTTGCCGCCG CGGCGCTGGC TCTGACGCTG
TATAGCGCGG CGTACTGTAC GGAAATTTTC CGCGCGGGGC TGCAATCCAT CGATCACGGA
CAGTGGGAAG GCGCAAAAGC GCTGGGCATG CGGCAGGCCG TGATCCTGCG GCGCGTGGTT
CTGCCACAGG TGTTACGCAA TATGCTGCCC GCTTTGACCA ACCGGATGAT CGAACTGGCC
AAGGTGACCT CACTGGCTTC CATACTGGCC GTCAACGAAC TGATGTATCA GGGCCGGCTG
CTGAGCAGCA CCTATTATCG TCCGTTGGAA ATCCTGACAG TGGTCGCGCT GCTCTATTTC
ATTTTGATCT GGCCGGGGAG TTACCTTGCC GCACGACTTG AACGTCGTTT CCGTTCAACC
CCCTAG
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| Protein sequence | MHYQWDFSLV WDNLPVLLKG LGVTLELWLL AGVLGTVLGL VFGLFRVFGK RWLSLPARVF
VEIFRNTPVL IQLIWFYYAF PVLVGIQFST FAAAALALTL YSAAYCTEIF RAGLQSIDHG
QWEGAKALGM RQAVILRRVV LPQVLRNMLP ALTNRMIELA KVTSLASILA VNELMYQGRL
LSSTYYRPLE ILTVVALLYF ILIWPGSYLA ARLERRFRST P
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