Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2691 |
Symbol | |
ID | 8133644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3054483 |
End bp | 3055298 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865979 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_003018257 |
Protein GI | 253689067 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAA CAACAATGAT TTTATCCACC AGTTTGTCCG CTATCGTGCT ATCTGGCACC GCATTCGCTG CAGAGTCGGA AGCATCGTCG CCCTCGCTCT TGGGCGATCA CACGGATGTG ACCGTGGGCG TTGCCGCCCA GAATGCGCCG CGTTATCGAG GGAGTAAAGC TCGTCAAACC AACGCACTGC CTGTACTGAC CATTCAGCGC GGCCCACTCT ATTTCGACTC CTCGCACGGC ATTGGCTGGC AATACCAATC GCCTTCCGGT TTTTATCTGG ATCACGCGAT TGGCTACGAC ATGGGAAGGG ATGACAAAAA CAGCCAATGG CGCGCAGGCT CAAACCGACT GAAAGGAATG GGTAAGGTTA AAGGATCGGT AACCACCACC GTAACGGCGG GGTATCAGTT TGCGCCGTGG CTGGCGCTGG AAGCGAGCGG CGAATTTGCA CTGAGTGAGA CAAAAAGGGG AAACCAGTAC CGCGTCGGAG CAAAGAGCAC GGTATGGCAG TCTGCGGCAA AAGACGATGT GCTGGCGCTG TCGGCGGACG TGCTGATGGG GGATGCTCGC TTTAACCAAA CCTACTACGG CGTGACGCAG CAGCAGAGTC AGCGCTCTGG ATTGGCCGCG TACCATGCTG GAAAAGGCGT TTACGGCTAT GCGCTGGGCG CGAACTGGAC GCATCAATTT AGCCCCGCCT GGTCAACGAA CGTCGGGGTG ACCTCAACCT GGCTCACTGA CAAGGTTGCT GATAGTCAGG TGGTGGAACG ACGGAATGAT ACCAGCGCCA CGCTGGCCGT TCTGTATTCG TTCTGA
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Protein sequence | MNITTMILST SLSAIVLSGT AFAAESEASS PSLLGDHTDV TVGVAAQNAP RYRGSKARQT NALPVLTIQR GPLYFDSSHG IGWQYQSPSG FYLDHAIGYD MGRDDKNSQW RAGSNRLKGM GKVKGSVTTT VTAGYQFAPW LALEASGEFA LSETKRGNQY RVGAKSTVWQ SAAKDDVLAL SADVLMGDAR FNQTYYGVTQ QQSQRSGLAA YHAGKGVYGY ALGANWTHQF SPAWSTNVGV TSTWLTDKVA DSQVVERRND TSATLAVLYS F
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