| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2683 |
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| Symbol | |
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| ID | 8133636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3042909 |
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| End bp | 3043841 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865971 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003018249 |
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| Protein GI | 253689059 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATG GAAAATCGAG TATGCGTACA ACCGATCATC TGGGCGGTAT CAACGCCTTT
GTTACCACGG CACAGCAGGG AAGCTTTACC GCTGCGGCTG AACGGCTGGG GCTAACTAAA
TCTGCGGTGG GAAAGAGCGT CAGCCGCCTT GAGGATAGAC TTGGGCTAAA GTTATTTCAG
CGTTCTACGC GTCGCCTGAG CCTCACGCCG GATGGTGAGC GCTTTCTGGC CAGTTGCCAG
AGCGCAATGG ATATTCTTGA ACAAGCCGAA GCCGAACTGA CGTCTCACCT CTGTCAGCCG
GCAGGGAGGC TCAGGGTGGA TTTGCCCGCT GCATTTGGCA GGCAGCGCAT TCTGCCTATC
CTGCTGAACA TCACCCGTCG CTACCCTGAA CTGGCGCTGA CCGTGACCTT CAGTGAACGG
TTTGTTGACC CGATTGAAGA CGGGATTGAC CTTGTCATCC GCATCGGTGA GCTTGCCGAC
AGTAGTGGTC TGGTGGCGAG ACGGCTGACA ACCCAGAAAC TGGTCATCTG TGCTTCGCCG
GACTACCTGC TGAATCAGGG TGAACCGGTA TCGGTAGAGG CGCTGAGTCA ACATCACTGC
GTGGTGGGAT TTCGCCGTAA TCAGCCAATT TCCTGGTTGT TGAAGGACGA TACCGGGCAG
ATCGCGCGCT ATACCCCGCC GGCCACGCAT GAATTTGCCG ATGGCGATGC GATGTTAGCT
GCCGTGCTTG CTGGGTGTGG TTTGTCTCAG CTGCCGCGTT GGCTGGTCGG TAAATACCTT
GAAAGCGGCG AACTGAAAGA GGTGCTTGTC AGCCATGCCG GCGGTGAAAT GCCGATCAGC
GCGCTATGGC CTAAAAGCCG TCAGCTACTG CCCAAGATAC GCCACGTGGT GGATACGTTA
GTCAAGGCGG CAGAAGACGG CCAGTTGGAC TGA
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| Protein sequence | MFNGKSSMRT TDHLGGINAF VTTAQQGSFT AAAERLGLTK SAVGKSVSRL EDRLGLKLFQ
RSTRRLSLTP DGERFLASCQ SAMDILEQAE AELTSHLCQP AGRLRVDLPA AFGRQRILPI
LLNITRRYPE LALTVTFSER FVDPIEDGID LVIRIGELAD SSGLVARRLT TQKLVICASP
DYLLNQGEPV SVEALSQHHC VVGFRRNQPI SWLLKDDTGQ IARYTPPATH EFADGDAMLA
AVLAGCGLSQ LPRWLVGKYL ESGELKEVLV SHAGGEMPIS ALWPKSRQLL PKIRHVVDTL
VKAAEDGQLD
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