Gene PC1_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2679 
Symbol 
ID8133632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3038611 
End bp3039225 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content50% 
IMG OID644865967 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003018245 
Protein GI253689055 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAC ATATGAATAC TCCGTCCCCA CGCGGGCCGT CGGACCATAG CGTTCGAGAT 
CAGATTGTGG AAGCGGCTAC TGAGCACTTC GGACACTTTG GGTATGAGAA GACAACCGTG 
TCCGATCTGG CCAAAGCGAT TGGCTTTTCT AAGGCATACA TCTACAAGTT TTTTGATTCC 
AAACAGGCCA TCGGGGAGAT GATTTGTACT AATCGACTGG CAACGATTAT GGATATTGTC 
AACGCCGCGA TGATGGATGC GCCAACGGCT TCAGAAAAGC TGAGGCGTCT GTATAAGGCC 
TTGATAGAAG CGGGTAGCGA TTTATTTTTT CACGATCGCA AGCTTTATGA GATCGCCGCG 
GTATCCTCGC GCGAACGGTG GCCTTCAGCC GTTGCGTATG AAGAAAAATT ACGCCAGCTT 
GTTCAGCAAA TTCTTCTCGA GGGACGACAA TCCGGGGAAT TTGAACGCAA GACGCCGCTG 
GATGAGGCGG CAGATGCCAT CTATCTGGTC ATGCGCCCTT ACGCTTGCCC TATTCAACTG 
CAATATAACC TGGATTCGTC AGCGTCCGCT GCGGTGTTAC TGCCGTCGTT GATATTGCGT 
AGTCTGGCAC CATAA
 
Protein sequence
MTKHMNTPSP RGPSDHSVRD QIVEAATEHF GHFGYEKTTV SDLAKAIGFS KAYIYKFFDS 
KQAIGEMICT NRLATIMDIV NAAMMDAPTA SEKLRRLYKA LIEAGSDLFF HDRKLYEIAA 
VSSRERWPSA VAYEEKLRQL VQQILLEGRQ SGEFERKTPL DEAADAIYLV MRPYACPIQL 
QYNLDSSASA AVLLPSLILR SLAP