Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2675 |
Symbol | |
ID | 8133628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3031706 |
End bp | 3032878 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644865963 |
Product | hypothetical protein |
Protein accession | YP_003018241 |
Protein GI | 253689051 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACATC ACTCGGTGGC CAGCCTAATC AGAGTAACCG TCATTACTGC ATTGTTTTGT CTTACCTTTT CTTCCATCGC TGCTCTACCG GATGTTTCGC TCAAACACCA GCAATTCGAA GGACTGATCA GAGAACCGCT TTCATTACAG GTCACACTGA ATAATGGTGA GCCAGCACTA CTCGATGCAT TCGTCACCCG GCCAGTCAGC CAAGCGAAAC TCCCGGTAGT GGTGATTACT AATGGCACCG TGGGTACTGC TGAGTTTGAT CGCTGGGAAA TGAACCCAAA TCGTGAATCG TCCACAGCGC TTGCCTTTGC ACGCCACGGT TATGCGGCGG TTACCGTTCT GCGGGAGGGA TACGGTTATT CAAGCGGCGG AGCTGAATAT TCAGGCGGTT CCTGTAAACA GCCTCTGCAT AAGCTGGCAG GTGAAAAAGA CACAAGAGAT ATACTGGCCG CGCTTGACGC AATAAGGCAC CAGCCCTGGG CTTCTCCAGA TAAGGCAGTT CTGGCAGGCA TGTCAGCAGG CGGTTTTGCT GTTCTGGCAA CCAGCGCGGT TAACCCGCCC GGTGTTCAGG CTATCATCAA TTTTGACGGT GGTAGAGGTT CCATCGACGG CAAATCACTT TGTGATAGAG CCGGTCTGAT TAACGCATTC ACCACGTATG GCCTCACTGC TCGCATCCCT TCACTGTGGC TCTATTCCAG CAACGATCAA TCTTTCACGC CAGAAATGGG CAGAGCATTT TCTGAGGCCT ATCGCAGCGG TGGAGGTAAA GCAGAATTTA TTGAAATGCC TGCTTTTGGA AAGAATGGAC ACGTCTTTAT GGATACCGCA CCAGAAGATT TCTGGTGGAA AACCGTGACG GGATTCCTTG CGCAGCAACA CTTGCCAGTC GATGAAGTCG TCTCCTTACC GACAGTACAC CTTACTTCCC CCGCAAACCT TAATAACCTT GCGGGCAAAA AAGCGTTCAG GAAATACGAA GCGGCACGGC TTTATGAGAA GGCATTTGCG ACAGGAAAAG ACGGGTCATG GGGAACGGCA TATTGGGCAC GGACCGGCCA TGAAGCGGCT GATACCGCCG TCAGAAACTG TGAAAAATTC CAGCCCAAAG GGGCTGCCAA CTGTACTGTC TATGCCATCA ATGATGTGGT GGTAACACAG TAA
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Protein sequence | MRHHSVASLI RVTVITALFC LTFSSIAALP DVSLKHQQFE GLIREPLSLQ VTLNNGEPAL LDAFVTRPVS QAKLPVVVIT NGTVGTAEFD RWEMNPNRES STALAFARHG YAAVTVLREG YGYSSGGAEY SGGSCKQPLH KLAGEKDTRD ILAALDAIRH QPWASPDKAV LAGMSAGGFA VLATSAVNPP GVQAIINFDG GRGSIDGKSL CDRAGLINAF TTYGLTARIP SLWLYSSNDQ SFTPEMGRAF SEAYRSGGGK AEFIEMPAFG KNGHVFMDTA PEDFWWKTVT GFLAQQHLPV DEVVSLPTVH LTSPANLNNL AGKKAFRKYE AARLYEKAFA TGKDGSWGTA YWARTGHEAA DTAVRNCEKF QPKGAANCTV YAINDVVVTQ
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