Gene PC1_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2675 
Symbol 
ID8133628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3031706 
End bp3032878 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content51% 
IMG OID644865963 
Producthypothetical protein 
Protein accessionYP_003018241 
Protein GI253689051 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACATC ACTCGGTGGC CAGCCTAATC AGAGTAACCG TCATTACTGC ATTGTTTTGT 
CTTACCTTTT CTTCCATCGC TGCTCTACCG GATGTTTCGC TCAAACACCA GCAATTCGAA
GGACTGATCA GAGAACCGCT TTCATTACAG GTCACACTGA ATAATGGTGA GCCAGCACTA
CTCGATGCAT TCGTCACCCG GCCAGTCAGC CAAGCGAAAC TCCCGGTAGT GGTGATTACT
AATGGCACCG TGGGTACTGC TGAGTTTGAT CGCTGGGAAA TGAACCCAAA TCGTGAATCG
TCCACAGCGC TTGCCTTTGC ACGCCACGGT TATGCGGCGG TTACCGTTCT GCGGGAGGGA
TACGGTTATT CAAGCGGCGG AGCTGAATAT TCAGGCGGTT CCTGTAAACA GCCTCTGCAT
AAGCTGGCAG GTGAAAAAGA CACAAGAGAT ATACTGGCCG CGCTTGACGC AATAAGGCAC
CAGCCCTGGG CTTCTCCAGA TAAGGCAGTT CTGGCAGGCA TGTCAGCAGG CGGTTTTGCT
GTTCTGGCAA CCAGCGCGGT TAACCCGCCC GGTGTTCAGG CTATCATCAA TTTTGACGGT
GGTAGAGGTT CCATCGACGG CAAATCACTT TGTGATAGAG CCGGTCTGAT TAACGCATTC
ACCACGTATG GCCTCACTGC TCGCATCCCT TCACTGTGGC TCTATTCCAG CAACGATCAA
TCTTTCACGC CAGAAATGGG CAGAGCATTT TCTGAGGCCT ATCGCAGCGG TGGAGGTAAA
GCAGAATTTA TTGAAATGCC TGCTTTTGGA AAGAATGGAC ACGTCTTTAT GGATACCGCA
CCAGAAGATT TCTGGTGGAA AACCGTGACG GGATTCCTTG CGCAGCAACA CTTGCCAGTC
GATGAAGTCG TCTCCTTACC GACAGTACAC CTTACTTCCC CCGCAAACCT TAATAACCTT
GCGGGCAAAA AAGCGTTCAG GAAATACGAA GCGGCACGGC TTTATGAGAA GGCATTTGCG
ACAGGAAAAG ACGGGTCATG GGGAACGGCA TATTGGGCAC GGACCGGCCA TGAAGCGGCT
GATACCGCCG TCAGAAACTG TGAAAAATTC CAGCCCAAAG GGGCTGCCAA CTGTACTGTC
TATGCCATCA ATGATGTGGT GGTAACACAG TAA
 
Protein sequence
MRHHSVASLI RVTVITALFC LTFSSIAALP DVSLKHQQFE GLIREPLSLQ VTLNNGEPAL 
LDAFVTRPVS QAKLPVVVIT NGTVGTAEFD RWEMNPNRES STALAFARHG YAAVTVLREG
YGYSSGGAEY SGGSCKQPLH KLAGEKDTRD ILAALDAIRH QPWASPDKAV LAGMSAGGFA
VLATSAVNPP GVQAIINFDG GRGSIDGKSL CDRAGLINAF TTYGLTARIP SLWLYSSNDQ
SFTPEMGRAF SEAYRSGGGK AEFIEMPAFG KNGHVFMDTA PEDFWWKTVT GFLAQQHLPV
DEVVSLPTVH LTSPANLNNL AGKKAFRKYE AARLYEKAFA TGKDGSWGTA YWARTGHEAA
DTAVRNCEKF QPKGAANCTV YAINDVVVTQ