Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2659 |
Symbol | |
ID | 8133607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3015205 |
End bp | 3015627 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644865942 |
Product | P2 GpU family protein |
Protein accession | YP_003018225 |
Protein GI | 253689035 |
COG category | [R] General function prediction only |
COG ID | [COG3499] Phage protein U |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGATGA TTCTGGGTAT GTTCGTTTTC ATGCGGCAAA CTGCGCCGTA CCAATCCCTA AGCCATGACA GCAGCTGGCG ACATGTTAAA AATGACCGAG TAGGCAGATC CCCGCGTTAT CAGTACATCG GCGCAGGGGA AGATAAAATC ACTCTGGCTG GTGAGCTGTA CCCAGAAATA ACCGGCGGTG ACGTGTCATT AAACGTGCTG GAAACAATGG CCTACACAGG AAAAGCCTGG CCGCTGATCG AAGGGACGGG CAACATCTAC GGTATGTACG TGATTACCAA CATTAACAAA ACCCGTTCTG AGTTTTTTAA TGATGGGAAA GCGCGGCATA TCTCATTTAC ATTGAACCTT GAGCGGGTTA GCGAGGATTT GCGGGAAATG CTGGGTGATA TGGATATCGG GCTATCCGGA TAA
|
Protein sequence | MMMILGMFVF MRQTAPYQSL SHDSSWRHVK NDRVGRSPRY QYIGAGEDKI TLAGELYPEI TGGDVSLNVL ETMAYTGKAW PLIEGTGNIY GMYVITNINK TRSEFFNDGK ARHISFTLNL ERVSEDLREM LGDMDIGLSG
|
| |