| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2640 |
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| Symbol | |
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| ID | 8133588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3000175 |
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| End bp | 3001242 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865923 |
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| Product | phage portal protein, PBSX family |
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| Protein accession | YP_003018206 |
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| Protein GI | 253689016 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.705572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGTA AGAAACAGCA CCCGCGCACG GCCAATCTAC GCGCCCCAGC CGCACAGACG
CCCGTAACAG GGGAATTAAT CCAACAGCCG ATTGAGTCAC TACAGTCTTT CTCATTTGGT
GACGCACAGC CCATCATGGA CAGGCGCGAC CTGTTGGACT GCATGGAGTG CGCCAGAAAT
GGCCGCTGGT ATGAACCACC GATCAGCACC TACGGTCTGG CGCGAATGTT TGACGTTGCC
GTGCATCATC AGTCACCGAT ACTGTTCAAA CGCAATGTCA TCATGTCCTG CTACGAGCCA
CACCCGCTGT TATCACGGCA GGATGCCAGC GCCTTTGTAC TCGACTGGCT GGTATTCGGT
AACGCTTATC TGGAACTGAG AAAGAACCGT TTCGGCCAAC CACTGAAGCT AAAGCACACC
CACGCCAAGT ACACCCGACG CGGGGAGAAT CTGGATCAGT ACTGGTTTGT GACGTACTAC
GCCAACGATC ACGAATTCGA GCCAGGCAGC GTGTTCCACG TTAAAAGCCC CAGCATTCAC
CAGGAAATCT ACGGCACACC GGAATATATG GCGGTAATCC AATCAGCGAT GCTGAATGGG
GAAGCCACGT TGTTCCGGCG TAATTACTAC ATCAACGGTA GCCATGCGGG GGTGATTGTC
TACCTCACCG ATCCCATCAC CAACAATGCT GACGTCGAGC AATTGAAGAA GTCGCTGAAA
GATGCGCGTG GCAATGGGGC ATTTAAGAAC CTGTTTGTTT ACGCGGCAGG CGGGAAGAAA
GACGGCTTGC AAATCCTGCC GTTTAGTCAG ATTGCGGCCA AAGATGAGTT TACCGGCATC
AAGGACGCTA CCCGCGACGA CATGTTAGCC GCGCACCGTG TACCGCCCAA CTTAATGGGG
ATTATGCCGA ACAATGCAGG GGGATTTGGT GACGTAGAGA AGGCCGCGAA GGTATTCGCC
ATCAACGAAC TCATGCCGAT AATGGAAAGC CTGAAAGAGC TTAACGACTG GCTGGGGATC
GAGGTACTTC GGTTCAAGCC TTATGCCCTG GCCGAAGGTG CAATGTAA
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| Protein sequence | MSRKKQHPRT ANLRAPAAQT PVTGELIQQP IESLQSFSFG DAQPIMDRRD LLDCMECARN
GRWYEPPIST YGLARMFDVA VHHQSPILFK RNVIMSCYEP HPLLSRQDAS AFVLDWLVFG
NAYLELRKNR FGQPLKLKHT HAKYTRRGEN LDQYWFVTYY ANDHEFEPGS VFHVKSPSIH
QEIYGTPEYM AVIQSAMLNG EATLFRRNYY INGSHAGVIV YLTDPITNNA DVEQLKKSLK
DARGNGAFKN LFVYAAGGKK DGLQILPFSQ IAAKDEFTGI KDATRDDMLA AHRVPPNLMG
IMPNNAGGFG DVEKAAKVFA INELMPIMES LKELNDWLGI EVLRFKPYAL AEGAM
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