| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2622 |
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| Symbol | |
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| ID | 8133570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2989228 |
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| End bp | 2990235 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644865905 |
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| Product | integrase family protein |
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| Protein accession | YP_003018188 |
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| Protein GI | 253688998 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.647869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAA GTAAACTCCC ATCCGGCAAA TGGCTTTGCC AGTGCTTCCC TTATGGTCGT
GATGGTAAAC GTATCCGCAA GCAGTTTTCC ACCCGTGGTG AGGCACTTTC CTATGAGCGC
CGCCTTATGG CCGATAAAAA AGGCATTGAT ACCACAACCA GTAACATCAC TCTGAAAGAT
TTGGTTCAGC GTTGGTATGA CATGCACGGC AAAACTCTGT CATCCGGTGA TTCCCGTTAC
ACGAAATTAC TCGCCATTTG TGAACGCTTG GGCGATCCGT TTGCTATCGA CGTTGATAAA
AATATGTTTG CCGTTTACCG CGAACGACGC CTTAAAGGTG AGTGGAATCC AAAGGGTAAA
GCCGTTCTGA AAGAAGCGAC GGTCAACCGT GAATACTCTT ACCTGCGTGC TGTATTCTCC
GAACTGAAAA GGATGGGGGA GTGGGATAAA GAAAATCCGT TGGATGGCAT ACGGCAATTC
AAAGAGGGTG ATCAGGAACT GGCATTTCTC TATCCAGAAG AAATAAAGCG CCTGCTGGCT
GCGTGTGATG AATCAGACAA TAAGGATTTG GGTATTATCG TTCGCTTGTG CCTGGCTACC
GGAGCACGGT GGAGTGAAGC ACAGGATTTA AAGCAATCTC AAATCCTGCC AAACCGTGTC
ACGTTCACCA AAACGAAAGG CAACAAGAAC AGAACGGTGC CAATTTCTGA GAAGATGCGC
AGCTTGCTGC CTAAAAAACG TGGGGCGCTT TTCACCCCAG CTTATGAGTC TTTCAAGTAC
GCCATTAAAC GGGCTGGCAT TGAATTACCG AGCGGGCAGC TTACCCACGT TTTACGTCAC
TCATTCGCAT CACATTTCAT GATGAACGGC GGAAACATTC TGGTACTGCA ACAGATTTTA
GGCCACAGCA CGATCACCAT GACGATGCGT TACGCCCACT TTTCGCCGGA TCATTTGGAT
GCGGCTGTTA CCCTAAATCC GTTTGATTCA TTAGAAATAG ATAAGTAA
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| Protein sequence | MSVSKLPSGK WLCQCFPYGR DGKRIRKQFS TRGEALSYER RLMADKKGID TTTSNITLKD
LVQRWYDMHG KTLSSGDSRY TKLLAICERL GDPFAIDVDK NMFAVYRERR LKGEWNPKGK
AVLKEATVNR EYSYLRAVFS ELKRMGEWDK ENPLDGIRQF KEGDQELAFL YPEEIKRLLA
ACDESDNKDL GIIVRLCLAT GARWSEAQDL KQSQILPNRV TFTKTKGNKN RTVPISEKMR
SLLPKKRGAL FTPAYESFKY AIKRAGIELP SGQLTHVLRH SFASHFMMNG GNILVLQQIL
GHSTITMTMR YAHFSPDHLD AAVTLNPFDS LEIDK
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