Gene PC1_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2615 
Symbol 
ID8133563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2981623 
End bp2981973 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content39% 
IMG OID644865898 
Producttranscriptional activator FlhD 
Protein accessionYP_003018181 
Protein GI253688991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00174492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACCT CTGAATTACT CAAACACATT TATGACATTA ATCTGTCTTA TTTGTTACTG 
GCGCAACGCT TAATTAATGA TGAAAAAGCT TCTGCGATGT TCCGTCTTGG AATCAATGAC 
GAGATGGCAG ATACCTTGAT GCAACTGACT TTACCGCAGA TGGTGAAGTT GGCAGAAACT 
AACCAATTGA TATGCCATTT CCGTTTTAAC GATCACAATA CAATCAAAGT GTTGACTCAG 
GAATCACGTG TGGATGATTT ACAGCAAATT CATACCGGGA TTCTGTTGTC GAGTCACTTA 
TTACAACAGT TAACTTCGAA AGAAGAAAAC CTGCCTAAGA AAAGGGCATA A
 
Protein sequence
MGTSELLKHI YDINLSYLLL AQRLINDEKA SAMFRLGIND EMADTLMQLT LPQMVKLAET 
NQLICHFRFN DHNTIKVLTQ ESRVDDLQQI HTGILLSSHL LQQLTSKEEN LPKKRA