Gene PC1_2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2614 
Symbol 
ID8133562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2981041 
End bp2981619 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content44% 
IMG OID644865897 
Producttranscriptional activator FlhC 
Protein accessionYP_003018180 
Protein GI253688990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00253226 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGA AAAGTATTGT TCAGGAAGCG AAAGATATCC AATTAGCAAT GGAGCTCATT 
TCGCTTGGTG CTCGTTTACA GATGTTAGAA AGTGAAACTC AGTTAAGCCG CGGACGTTTG 
ATTAAACTCT ACAAAGAACT GAGAGGAAGT CCGCCGCCAA AGGGAATGCT ACCTTTTTCA 
ACGGATTGGT TTATGACCTG GGAACAGAAT ATTCATTCAT CAATGTTCTA CAACGCATAC 
AGCTTTTTAA TCAAGAATGG ACAGTGTAGT GGTGTTGAAG CGGTTATTAA ATCTTACCGG 
CTTTATCTCG AACAGTGTGC GCCGCAGAGC GATTCTCCAC TGTTGGCATT GACGCGAGCT 
TGGACATTAG TCCGGTTTGT TGACAGCGGT ATGCTGCAAC TGTCGTCATG CAATTGCTGC 
AAAGGGATGT TCATTACTCA CGCTCATCAA CCTAAAAACA GTTTTGTTTG TAGTTTGTGC 
CAACCCCCTT CCAGAGCGGT AAAAAAGCGT AAACTTTCGC AAAATCTTGC CGATATAATA 
CCTCAACTGC TGGATGAACA GGTAAAACAC GCAGTCTGA
 
Protein sequence
MAEKSIVQEA KDIQLAMELI SLGARLQMLE SETQLSRGRL IKLYKELRGS PPPKGMLPFS 
TDWFMTWEQN IHSSMFYNAY SFLIKNGQCS GVEAVIKSYR LYLEQCAPQS DSPLLALTRA 
WTLVRFVDSG MLQLSSCNCC KGMFITHAHQ PKNSFVCSLC QPPSRAVKKR KLSQNLADII 
PQLLDEQVKH AV