| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2606 |
|---|
| Symbol | |
|---|
| ID | 8133554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2971702 |
|---|
| End bp | 2972091 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644865889 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003018172 |
|---|
| Protein GI | 253688982 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.677486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATA AAGAACTCAG ATTTCTGGTA GTGGATGATT TTTCGACGAT GCGCCGAATT
GTCCGTAACC TGCTGAAGGA ACTGGGCTTT AATAACGTAG AAGAGGCAGA GGATGGCGCT
GATGCGCTGA ACAAGCTTCG TGCTGGTGCT TTTGATTTCG TCATTTCTGA CTGGAATATG
CCTAACATGG ATGGACTGGA GCTGCTGCAG ACTATTCGTG CTGACGGTTC GCTTTCCAGC
CTTCCGGTGC TGATGGTAAC TGCGGAAGCG AAGAAAGAGA ACATTATCGC TGCAGCACAA
GCGGGTGCTA GCGGCTATGT AGTTAAACCA TTTACTGCAG CTACCCTTGA AGAAAAACTG
AATAAGATTT TCGAAAAATT GGGTATGTAA
|
|---|
| Protein sequence | MADKELRFLV VDDFSTMRRI VRNLLKELGF NNVEEAEDGA DALNKLRAGA FDFVISDWNM
PNMDGLELLQ TIRADGSLSS LPVLMVTAEA KKENIIAAAQ AGASGYVVKP FTAATLEEKL
NKIFEKLGM
|
|---|
| |