Gene PC1_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2596 
SymbolflgD 
ID8133544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2963847 
End bp2964521 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content49% 
IMG OID644865880 
Productflagellar basal body rod modification protein 
Protein accessionYP_003018163 
Protein GI253688973 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.661244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAA CTATTAATGA TACTTCCTCG GCACAGAGTA CATCGAGTGT CTCGTCGACA 
ACGGCGGTAG AGAAAAATAG TAGTGCCGAC CTACAGAACC AGTTTCTGAC GCTTTTGGTT 
GCGCAGTTGA AGAATCAGGA TCCAACGAAT CCGATGAGCA ACGATCAGCT TGTTAGCCAG 
CTTGCTCAGC TCAATACAGT GAGTGGTATT GAAAAACTGA ATACCACCTT GGGTTCTATT 
TCCGGCCAGA TCAATAACAA CCAATCCATG CAGGCAACGA CGCTGATTGG TCATAGTGTC 
ATGATCCCTG GAAAAGACAT TCTTGTGGGT AAAGAAACCA GTACTCCCTT TGGTGTGGAA 
CTGGAGAAAG CCGCAGAAGT CGTTACTGTC ACCGTTAATG ATGCGACTGG TAAAGCCGTT 
CGCACGATCG AATTGGGGAC GCTTTCTGCC GGTGTTCACT CGTTTAACTG GGATAGTAAG 
CTTTCTGATG GCACGGTTGC GCCTGATGGT GCTTATACCT TCACTGTCGC TGCCAGCACG 
GGCGGCGCGC AGCAAGTTGT TCAGCCATTG AGCTATGCGG TTGTAAATAG TGTCGTTCGC 
GGCGATAGCG GTGCATTGCT GGATTTAGGA CTGCGTGGCA GAGCCACCAT GGACGATGTC 
CGGCAGATTC TGTAA
 
Protein sequence
MSVTINDTSS AQSTSSVSST TAVEKNSSAD LQNQFLTLLV AQLKNQDPTN PMSNDQLVSQ 
LAQLNTVSGI EKLNTTLGSI SGQINNNQSM QATTLIGHSV MIPGKDILVG KETSTPFGVE 
LEKAAEVVTV TVNDATGKAV RTIELGTLSA GVHSFNWDSK LSDGTVAPDG AYTFTVAAST 
GGAQQVVQPL SYAVVNSVVR GDSGALLDLG LRGRATMDDV RQIL