Gene PC1_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2584 
Symbol 
ID8133532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2952561 
End bp2952983 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content47% 
IMG OID644865868 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_003018151 
Protein GI253688961 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAG CCTCGGTATC ACCTCCGACT CCAGTAACAA GTCAGCAGTC GACGCTTGTT 
ACTGAGCCAC CACTTACCGG CAGCATGCTA CTGACACAGG TTGGTAGTGT GCTCGCTGGT
ATTTTATTAT TTATTCTGCT GATTGCCTGG TTCGTTCGCA AACTGGGTTT TGTACCGCAA
GCCAAGCAAA ATAAGTTGCT AAAAGTGGTA TCCAGTTGCC CTGTTGGGCA ACGTGAACGT
GTAGTTATTG TAGAAGTTGA TAATACCTGG CTGGTGTTAG GTGTTACTGC TCAACAAATC
ACACCTCTGC ATACGCTCCC AGCACAACCA ACCAACGACA GTTCATCTGC TGGCGGTAAC
AAGCCGGTCG ATTTCAACCA ACTGTTAAAG AAAGTTTTAA AGCGTCCGGA AAAGTCGGAA
TGA
 
Protein sequence
MAIASVSPPT PVTSQQSTLV TEPPLTGSML LTQVGSVLAG ILLFILLIAW FVRKLGFVPQ 
AKQNKLLKVV SSCPVGQRER VVIVEVDNTW LVLGVTAQQI TPLHTLPAQP TNDSSSAGGN
KPVDFNQLLK KVLKRPEKSE